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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3211 O_BomoSK12891_complete:A_BomoSK_comp13117_c0_seq4
216bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3212 O_BomoSK12892_complete:A_BomoSK_comp13117_c0_seq4
199bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3213 O_BomoSK12893_complete:A_BomoSK_comp13117_c0_seq6
199bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3214 O_BomoSK12894_complete:A_BomoSK_comp13117_c0_seq8
461bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX18-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3215 O_BomoSK12895_complete:A_BomoSK_comp13118_c0_seq2
503bp
 PREDICTED:_bifunctional_coenzyme_A_synthase_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
3216 O_BomoSK12896_5prime_partial:A_BomoSK_comp13119_c0_seq1
585bp
 PREDICTED:_sorting_nexin_lst-4_isoform_X1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006886 P intracellular protein transport
GO:0007067 P mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019902 F phosphatase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0043621 F protein self-association
GO:0045335 C phagocytic vesicle
GO:0051020 F GTPase binding
GO:0090386 P phagosome maturation involved in apoptotic cell clearance
GO:0090389 P phagosome-lysosome fusion involved in apoptotic cell clearance
3217 O_BomoSK12897_3prime_partial:A_BomoSK_comp13120_c0_seq1
1124bp
 PREDICTED:_probable_RNA_helicase_armi,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000578 P embryonic axis specification
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007318 P pole plasm protein localization
GO:0007616 P long-term memory
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031023 P microtubule organizing center organization
GO:0031047 P gene silencing by RNA
GO:0032508 P DNA duplex unwinding
GO:0043025 C neuronal cell body
GO:0043186 C P granule
GO:0045202 C synapse
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
GO:0070725 C Yb body
GO:2000002 P negative regulation of DNA damage checkpoint
3218 O_BomoSK12898_complete:A_BomoSK_comp13121_c0_seq1
265bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
3219 O_BomoSK12899_complete:A_BomoSK_comp13121_c0_seq1
250bp
3220 O_BomoSK1289_complete:A_BomoSK_comp4062_c0_seq1
140bp
3221 O_BomoSK128_internal:A_BomoSK_comp414_c0_seq1
111bp
Uncharacterized_protein_OBRU01_16034_[Operophtera_brumata]
GO:0003823 F antigen binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
3222 O_BomoSK12900_3prime_partial:A_BomoSK_comp13121_c0_seq1
188bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
3223 O_BomoSK12901_complete:A_BomoSK_comp13121_c0_seq1
131bp
 Os05g0486150,_partial_[Oryza_sativa_Japonica_Group]
3224 O_BomoSK12902_3prime_partial:A_BomoSK_comp13121_c0_seq2
399bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
3225 O_BomoSK12903_complete:A_BomoSK_comp13121_c0_seq2
257bp
 Os05g0486150,_partial_[Oryza_sativa_Japonica_Group]
3226 O_BomoSK12904_3prime_partial:A_BomoSK_comp13122_c0_seq1
1541bp
 PREDICTED:_uncharacterized_protein_LOC101746698_isoform_X1_[Bombyx_mori]
3227 O_BomoSK12905_5prime_partial:A_BomoSK_comp13122_c0_seq1
172bp
3228 O_BomoSK12906_complete:A_BomoSK_comp13122_c0_seq1
122bp
 hypothetical_protein_PSTG_03928_[Puccinia_striiformis_f._sp._tritici_PST-78]
3229 O_BomoSK12907_complete:A_BomoSK_comp13122_c0_seq1
109bp
 PREDICTED:_helicase_domino-like_[Apis_mellifera]
3230 O_BomoSK12908_complete:A_BomoSK_comp13122_c0_seq1
102bp
3231 O_BomoSK12909_complete:A_BomoSK_comp13122_c0_seq1
101bp
 hypothetical_protein_G7K_3027-t1_[Saitoella_complicata_NRRL_Y-17804]
3232 O_BomoSK1290_3prime_partial:A_BomoSK_comp4063_c0_seq1
714bp
 PREDICTED:_inverted_formin-2-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
3233 O_BomoSK12910_5prime_partial:A_BomoSK_comp13123_c3_seq1
203bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3234 O_BomoSK12911_3prime_partial:A_BomoSK_comp13123_c3_seq1
127bp
 hypothetical_protein_CLF_101077_[Clonorchis_sinensis]
3235 O_BomoSK12912_complete:A_BomoSK_comp13123_c3_seq1
115bp
 Uncharacterised_protein_[Streptococcus_pneumoniae]
3236 O_BomoSK12913_complete:A_BomoSK_comp13123_c3_seq3
115bp
 Uncharacterised_protein_[Streptococcus_pneumoniae]
3237 O_BomoSK12914_5prime_partial:A_BomoSK_comp13123_c3_seq8
203bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3238 O_BomoSK12915_3prime_partial:A_BomoSK_comp13123_c3_seq8
127bp
 hypothetical_protein_CLF_101077_[Clonorchis_sinensis]
3239 O_BomoSK12916_5prime_partial:A_BomoSK_comp13123_c3_seq9
203bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3240 O_BomoSK12917_3prime_partial:A_BomoSK_comp13123_c3_seq9
127bp
 hypothetical_protein_CLF_101077_[Clonorchis_sinensis]
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