Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2881	O_BomoSK12594_complete:A_BomoSK_comp13013_c0_seq6 105bp	Bomo_Chr10	Pre-mRNA-processing-splicing_factor_8_[Trichinella_nelsoni]
2882	O_BomoSK12595_complete:A_BomoSK_comp13014_c0_seq1 1968bp	Bomo_Chr8	PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_heavy_chain,_muscle_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003774 F cytoskeletal motor activity GO:0003779 F actin binding GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005703 C polytene chromosome puff GO:0005737 C cytoplasm GO:0006936 P muscle contraction GO:0007298 P border follicle cell migration GO:0007427 P epithelial cell migration, open tracheal system GO:0007517 P muscle organ development GO:0007527 P adult somatic muscle development GO:0008152 P metabolic process GO:0008307 F structural constituent of muscle GO:0016459 C myosin complex GO:0030016 C myofibril GO:0030017 C sarcomere GO:0030239 P myofibril assembly GO:0030241 P skeletal muscle myosin thick filament assembly GO:0030898 F microfilament motor activity GO:0031033 P myosin filament organization GO:0031672 C A band GO:0032982 C myosin filament GO:0040011 P locomotion GO:0042623 F ATP hydrolysis activity GO:0042692 P muscle cell differentiation GO:0042803 F protein homodimerization activity GO:0045214 P sarcomere organization GO:0050821 P protein stabilization GO:0060361 P flight GO:0071689 P muscle thin filament assembly
2883	O_BomoSK12596_complete:A_BomoSK_comp13014_c0_seq1 417bp	Bomo_Chr8
2884	O_BomoSK12597_complete:A_BomoSK_comp13014_c0_seq1 333bp	Bomo_Chr8	myosin_heavy_chain_[Bombyx_mori]
2885	O_BomoSK12598_complete:A_BomoSK_comp13014_c0_seq1 257bp	Bomo_Chr8	chemotaxis_protein_[Plesiomonas_sp._ZOR0011]
2886	O_BomoSK12599_complete:A_BomoSK_comp13014_c0_seq1 227bp	Bomo_Chr8
2887	O_BomoSK1259_complete:A_BomoSK_comp4045_c0_seq1 134bp	Bomo_Chr13	hypothetical_protein_DM47_2552_[Burkholderia_mallei]
2888	O_BomoSK125_3prime_partial:A_BomoSK_comp410_c0_seq1 119bp	Bomo_Chr15	HUNB_BOMMO_RecName:_Full=Protein_hunchback	GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0035282 P segmentation GO:0040034 P regulation of development, heterochronic GO:0046872 F metal ion binding
2889	O_BomoSK12600_complete:A_BomoSK_comp13014_c0_seq1 179bp	Bomo_Chr8	hypothetical_protein_L345_14201,_partial_[Ophiophagus_hannah]
2890	O_BomoSK12601_complete:A_BomoSK_comp13014_c0_seq1 169bp	Bomo_Chr8	_hypothetical_protein_BOS_10232_[Bos_taurus]
2891	O_BomoSK12602_complete:A_BomoSK_comp13014_c0_seq1 151bp	Bomo_Chr8
2892	O_BomoSK12603_complete:A_BomoSK_comp13014_c0_seq1 141bp	Bomo_Chr8
2893	O_BomoSK12604_complete:A_BomoSK_comp13014_c0_seq1 132bp	Bomo_Chr8
2894	O_BomoSK12605_complete:A_BomoSK_comp13014_c0_seq2 1968bp	Bomo_Chr8	PREDICTED:_myosin_heavy_chain,_muscle_isoform_X8_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0003774 F cytoskeletal motor activity GO:0003779 F actin binding GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005703 C polytene chromosome puff GO:0005737 C cytoplasm GO:0006936 P muscle contraction GO:0007298 P border follicle cell migration GO:0007427 P epithelial cell migration, open tracheal system GO:0007517 P muscle organ development GO:0007527 P adult somatic muscle development GO:0008152 P metabolic process GO:0008307 F structural constituent of muscle GO:0016459 C myosin complex GO:0030016 C myofibril GO:0030017 C sarcomere GO:0030239 P myofibril assembly GO:0030241 P skeletal muscle myosin thick filament assembly GO:0030898 F microfilament motor activity GO:0031033 P myosin filament organization GO:0031672 C A band GO:0032982 C myosin filament GO:0040011 P locomotion GO:0042623 F ATP hydrolysis activity GO:0042692 P muscle cell differentiation GO:0042803 F protein homodimerization activity GO:0045214 P sarcomere organization GO:0050821 P protein stabilization GO:0060361 P flight GO:0071689 P muscle thin filament assembly
2895	O_BomoSK12606_complete:A_BomoSK_comp13014_c0_seq2 417bp	Bomo_Chr8
2896	O_BomoSK12607_complete:A_BomoSK_comp13014_c0_seq2 333bp	Bomo_Chr8	myosin_heavy_chain_[Bombyx_mori]
2897	O_BomoSK12608_complete:A_BomoSK_comp13014_c0_seq2 257bp	Bomo_Chr8	chemotaxis_protein_[Plesiomonas_sp._ZOR0011]
2898	O_BomoSK12609_complete:A_BomoSK_comp13014_c0_seq2 201bp	Bomo_Chr8
2899	O_BomoSK1260_complete:A_BomoSK_comp4047_c0_seq1 352bp	Bomo_Chr1	PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]	GO:0003677 F DNA binding GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005720 C heterochromatin GO:0006511 P ubiquitin-dependent protein catabolic process GO:0007049 P cell cycle GO:0008270 F zinc ion binding GO:0008283 P cell population proliferation GO:0010216 P maintenance of DNA methylation GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030154 P cell differentiation GO:0042393 F histone binding GO:0046872 F metal ion binding GO:0051726 P regulation of cell cycle GO:0051865 P protein autoubiquitination GO:0061630 F ubiquitin protein ligase activity GO:0071158 P regulation of cell cycle GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
2900	O_BomoSK12610_complete:A_BomoSK_comp13014_c0_seq2 179bp	Bomo_Chr8	hypothetical_protein_L345_14201,_partial_[Ophiophagus_hannah]
2901	O_BomoSK12611_complete:A_BomoSK_comp13014_c0_seq2 169bp	Bomo_Chr8	_hypothetical_protein_BOS_10232_[Bos_taurus]
2902	O_BomoSK12612_complete:A_BomoSK_comp13014_c0_seq2 151bp	Bomo_Chr8
2903	O_BomoSK12613_complete:A_BomoSK_comp13014_c0_seq2 141bp	Bomo_Chr8
2904	O_BomoSK12614_complete:A_BomoSK_comp13014_c0_seq2 132bp	Bomo_Chr8
2905	O_BomoSK12615_3prime_partial:A_BomoSK_comp13016_c0_seq1 127bp	Bomo_Chr5	hypothetical_protein_KGM_20196_[Danaus_plexippus]	GO:0003674 F molecular_function GO:0005768 C endosome GO:0005769 C early endosome GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016023 C cytoplasmic vesicle GO:0031410 C cytoplasmic vesicle GO:0051443 P positive regulation of ubiquitin-protein transferase activity
2906	O_BomoSK12616_internal:A_BomoSK_comp13016_c1_seq1 124bp	Bomo_Chr5	PREDICTED:_arrestin_domain-containing_protein_4_[Plutella_xylostella]	GO:0003674 F molecular_function GO:0005886 C plasma membrane GO:0007165 P signal transduction GO:0008150 P biological_process GO:0031410 C cytoplasmic vesicle
2907	O_BomoSK12617_complete:A_BomoSK_comp13017_c0_seq1 353bp	Bomo_Chr12	uncharacterized_protein_LOC692518_[Bombyx_mori]	GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0006633 P fatty acid biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016491 F oxidoreductase activity GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0017105 F acyl-CoA delta11-desaturase activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
2908	O_BomoSK12618_internal:A_BomoSK_comp13018_c0_seq2 172bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC106710629_[Papilio_machaon]
2909	O_BomoSK12619_complete:A_BomoSK_comp13019_c0_seq1 752bp	Bomo_Chr18	PREDICTED:_zinc_finger_CCCH_domain-containing_protein_14_isoform_X2_[Bombyx_mori]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0008143 F poly(A) binding GO:0016607 C nuclear speck GO:0043488 P regulation of mRNA stability GO:0044822 F RNA binding GO:0046872 F metal ion binding GO:1900364 P negative regulation of mRNA polyadenylation
2910	O_BomoSK1261_complete:A_BomoSK_comp4047_c0_seq2 858bp	Bomo_Chr1	PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000790 C chromatin GO:0000791 C euchromatin GO:0000792 C heterochromatin GO:0000987 F cis-regulatory region sequence-specific DNA binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005657 C replication fork GO:0005720 C heterochromatin GO:0006281 P DNA repair GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle GO:0008270 F zinc ion binding GO:0008283 P cell population proliferation GO:0008327 F methyl-CpG binding GO:0010216 P maintenance of DNA methylation GO:0010390 P histone monoubiquitination GO:0016363 C nuclear matrix GO:0016567 P protein ubiquitination GO:0016568 P chromatin organization GO:0016574 P histone ubiquitination GO:0016874 F ligase activity GO:0031493 F obsolete nucleosomal histone binding GO:0032270 P positive regulation of cellular protein metabolic process GO:0035064 F methylated histone binding GO:0042393 F histone binding GO:0042787 P ubiquitin-dependent protein catabolic process GO:0042802 F identical protein binding GO:0044729 F hemi-methylated DNA-binding GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0051865 P protein autoubiquitination GO:0061630 F ubiquitin protein ligase activity GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity