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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoSK10190_complete:A_BomoSK_comp12079_c0_seq6
196bp
 mitochondrial_genome_maintenance_MGM101_[Dacryopinax_sp._DJM-731_SS1]
212 O_BomoSK10191_3prime_partial:A_BomoSK_comp12081_c0_seq1
372bp
 PREDICTED:_rho_guanine_nucleotide_exchange_factor_10_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
213 O_BomoSK10192_complete:A_BomoSK_comp12081_c0_seq1
189bp
 hypothetical_protein_EUTSA_v10023829mg_[Eutrema_salsugineum]
214 O_BomoSK10193_complete:A_BomoSK_comp12081_c0_seq1
114bp
215 O_BomoSK10194_3prime_partial:A_BomoSK_comp12081_c0_seq2
265bp
 PREDICTED:_rho_guanine_nucleotide_exchange_factor_10_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
216 O_BomoSK10195_complete:A_BomoSK_comp12081_c0_seq2
129bp
 PREDICTED:_metabotropic_glutamate_receptor_7_isoform_X5_[Anser_cygnoides_domesticus]
217 O_BomoSK10196_complete:A_BomoSK_comp12081_c0_seq2
114bp
218 O_BomoSK10197_5prime_partial:A_BomoSK_comp12082_c0_seq1
296bp
 short-chain_dehydrogenease/reductase-like_[Bombyx_mori]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
219 O_BomoSK10198_complete:A_BomoSK_comp12082_c0_seq2
258bp
 short-chain_dehydrogenease/reductase-like_protein_[Danaus_plexippus]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
220 O_BomoSK10199_complete:A_BomoSK_comp12084_c0_seq1
248bp
 PREDICTED:_tubulin-folding_cofactor_B_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
221 O_BomoSK1019_complete:A_BomoSK_comp3812_c0_seq1
100bp
 histidinol-phosphate/aromatic_aminotransferase_and_cobyric_acid_decarboxylase_[Leptospira_weilii]
222 O_BomoSK101_5prime_partial:A_BomoSK_comp379_c1_seq1
110bp
 CG6659_[Drosophila_busckii]
223 O_BomoSK10200_complete:A_BomoSK_comp12084_c0_seq2
157bp
 putative_Tubulin-specific_chaperone_B_[Danaus_plexippus]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
224 O_BomoSK10201_complete:A_BomoSK_comp12085_c0_seq1
339bp
 PREDICTED:_G_kinase-anchoring_protein_1-like_[Papilio_xuthus]
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
225 O_BomoSK10202_complete:A_BomoSK_comp12085_c0_seq1
105bp
 surface_protease_GP63_[Trypanosoma_cruzi_Dm28c]
226 O_BomoSK10203_complete:A_BomoSK_comp12085_c0_seq2
253bp
 PREDICTED:_G_kinase-anchoring_protein_1-like_[Papilio_polytes]
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
227 O_BomoSK10204_complete:A_BomoSK_comp12085_c0_seq2
105bp
 surface_protease_GP63_[Trypanosoma_cruzi_Dm28c]
228 O_BomoSK10205_5prime_partial:A_BomoSK_comp12086_c0_seq1
625bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
229 O_BomoSK10206_complete:A_BomoSK_comp12086_c0_seq2
606bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
230 O_BomoSK10207_complete:A_BomoSK_comp12086_c0_seq3
471bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
231 O_BomoSK10208_5prime_partial:A_BomoSK_comp12086_c0_seq3
162bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031152 P aggregation involved in sorocarp development
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
232 O_BomoSK10209_complete:A_BomoSK_comp12086_c0_seq4
471bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
233 O_BomoSK1020_internal:A_BomoSK_comp3813_c0_seq1
172bp
 PREDICTED:_uncharacterized_protein_LOC106101297_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007411 P axon guidance
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
234 O_BomoSK10210_complete:A_BomoSK_comp12086_c0_seq4
143bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031152 P aggregation involved in sorocarp development
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0048870 P cell motility
GO:0055085 P transmembrane transport
235 O_BomoSK10211_complete:A_BomoSK_comp12087_c0_seq1
333bp
 PREDICTED:_KRR1_small_subunit_processome_component_homolog_[Plutella_xylostella]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
236 O_BomoSK10212_internal:A_BomoSK_comp12092_c0_seq1
644bp
 PREDICTED:_fibronectin_type-III_domain-containing_protein_3a_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
237 O_BomoSK10213_5prime_partial:A_BomoSK_comp12092_c0_seq1
109bp
238 O_BomoSK10214_complete:A_BomoSK_comp12093_c0_seq1
1337bp
 PREDICTED:_splicing_factor_3B_subunit_1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
239 O_BomoSK10215_complete:A_BomoSK_comp12093_c0_seq1
156bp
240 O_BomoSK10216_complete:A_BomoSK_comp12093_c0_seq1
112bp
 PREDICTED:_uncharacterized_protein_LOC105033695_[Elaeis_guineensis]
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