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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1711 O_BomoSK11540_5prime_partial:A_BomoSK_comp12650_c0_seq2
115bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_assembly_factor_5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032259 P methylation
GO:0032981 P mitochondrial respiratory chain complex I assembly
1712 O_BomoSK11541_internal:A_BomoSK_comp12650_c0_seq3
280bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_assembly_factor_5_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
1713 O_BomoSK11542_5prime_partial:A_BomoSK_comp12650_c0_seq3
141bp
 hypothetical_protein_H106_08939_[Trichophyton_rubrum_CBS_735.88]
1714 O_BomoSK11543_complete:A_BomoSK_comp12650_c0_seq4
194bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_assembly_factor_5-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032259 P methylation
GO:0032981 P mitochondrial respiratory chain complex I assembly
1715 O_BomoSK11544_5prime_partial:A_BomoSK_comp12650_c0_seq5
131bp
 Sn1-specific_diacylglycerol_lipase_beta_[Macaca_mulatta]
1716 O_BomoSK11545_3prime_partial:A_BomoSK_comp12650_c0_seq5
111bp
 PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_assembly_factor_5_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
1717 O_BomoSK11546_complete:A_BomoSK_comp12651_c0_seq1
266bp
 hypothetical_protein_KGM_17018_[Danaus_plexippus]
GO:0004168 F dolichol kinase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043048 P dolichyl monophosphate biosynthetic process
1718 O_BomoSK11547_complete:A_BomoSK_comp12651_c0_seq2
204bp
 PREDICTED:_dolichol_kinase_isoform_X1_[Amyelois_transitella]
1719 O_BomoSK11548_complete:A_BomoSK_comp12651_c0_seq3
490bp
 hypothetical_protein_KGM_17018_[Danaus_plexippus]
GO:0004168 F dolichol kinase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043048 P dolichyl monophosphate biosynthetic process
1720 O_BomoSK11549_complete:A_BomoSK_comp12651_c0_seq3
117bp
 MULTISPECIES:_signal_peptidase_I_[Oribacterium]
1721 O_BomoSK1154_3prime_partial:A_BomoSK_comp3938_c0_seq1
1128bp
 PREDICTED:_cytoplasmic_FMR1-interacting_protein_[Papilio_xuthus]
GO:0000902 P cell morphogenesis
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008360 P regulation of cell shape
GO:0017048 F small GTPase binding
GO:0022416 P chaeta development
GO:0030031 P cell projection assembly
GO:0030154 P cell differentiation
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0033627 P cell adhesion mediated by integrin
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0050807 P regulation of synapse organization
1722 O_BomoSK11550_complete:A_BomoSK_comp12652_c0_seq1
384bp
 PREDICTED:_uncharacterized_protein_LOC101741417_isoform_X1_[Bombyx_mori]
1723 O_BomoSK11551_3prime_partial:A_BomoSK_comp12653_c0_seq1
380bp
 Retrovirus-related_Pol_polyprotein_from_transposon_17.6-like_Protein_[Tribolium_castaneum]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1724 O_BomoSK11552_complete:A_BomoSK_comp12653_c0_seq1
272bp
 hypothetical_protein_RR46_00080_[Papilio_xuthus]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030479 C actin cortical patch
1725 O_BomoSK11553_complete:A_BomoSK_comp12653_c0_seq1
108bp
 PREDICTED:_uncharacterized_protein_LOC106116480_[Papilio_xuthus]
1726 O_BomoSK11554_3prime_partial:A_BomoSK_comp12654_c0_seq1
331bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006955 P immune response
GO:0008047 F enzyme activator activity
GO:0008285 P negative regulation of cell population proliferation
GO:0009615 P response to virus
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043085 P positive regulation of catalytic activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1727 O_BomoSK11555_complete:A_BomoSK_comp12654_c0_seq1
171bp
 hypothetical_protein_CYLTODRAFT_444835_[Cylindrobasidium_torrendii_FP15055_ss-10]
1728 O_BomoSK11556_3prime_partial:A_BomoSK_comp12654_c0_seq2
242bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
1729 O_BomoSK11557_complete:A_BomoSK_comp12654_c0_seq2
171bp
 hypothetical_protein_CYLTODRAFT_444835_[Cylindrobasidium_torrendii_FP15055_ss-10]
1730 O_BomoSK11558_3prime_partial:A_BomoSK_comp12654_c0_seq5
305bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1731 O_BomoSK11559_complete:A_BomoSK_comp12654_c0_seq5
171bp
 hypothetical_protein_CYLTODRAFT_444835_[Cylindrobasidium_torrendii_FP15055_ss-10]
1732 O_BomoSK1155_complete:A_BomoSK_comp3938_c0_seq1
110bp
 ABC_transporter_[Burkholderia_udeis]
1733 O_BomoSK11560_3prime_partial:A_BomoSK_comp12654_c0_seq6
268bp
 PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005874 C microtubule
GO:0006810 P transport
GO:0007281 P germ cell development
GO:0008354 P germ cell migration
1734 O_BomoSK11561_complete:A_BomoSK_comp12654_c0_seq6
171bp
 hypothetical_protein_CYLTODRAFT_444835_[Cylindrobasidium_torrendii_FP15055_ss-10]
1735 O_BomoSK11562_complete:A_BomoSK_comp12655_c0_seq1
370bp
 PREDICTED:_decapentaplegic_isoform_X1_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001715 P ectodermal cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005125 F cytokine activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007304 P chorion-containing eggshell formation
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007378 P amnioserosa formation
GO:0007391 P dorsal closure
GO:0007393 P dorsal closure, leading edge cell fate determination
GO:0007398 P ectoderm development
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007455 P eye-antennal disc morphogenesis
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008354 P germ cell migration
GO:0008360 P regulation of cell shape
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009948 P anterior/posterior axis specification
GO:0009950 P dorsal/ventral axis specification
GO:0010002 P cardioblast differentiation
GO:0010629 P negative regulation of gene expression
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016015 F morphogen activity
GO:0017145 P stem cell division
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0030721 P spectrosome organization
GO:0035147 P branch fusion, open tracheal system
GO:0035156 P fusion cell fate specification
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035168 P larval lymph gland hemocyte differentiation
GO:0035214 P eye-antennal disc development
GO:0035215 P genital disc development
GO:0035217 P labial disc development
GO:0035222 P wing disc pattern formation
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035230 C cytoneme
GO:0035263 P genital disc sexually dimorphic development
GO:0035309 P wing and notum subfield formation
GO:0036099 P female germ-line stem cell population maintenance
GO:0040007 P growth
GO:0042078 P germ-line stem cell division
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0045476 P nurse cell apoptotic process
GO:0045570 P regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045705 P negative regulation of salivary gland boundary specification
GO:0046620 P regulation of organ growth
GO:0046843 P dorsal appendage formation
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048066 P developmental pigmentation
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048542 P lymph gland development
GO:0048619 P embryonic hindgut morphogenesis
GO:0048636 P positive regulation of muscle organ development
GO:0060323 P head morphogenesis
GO:0060395 P SMAD protein signal transduction
GO:0061320 P pericardial nephrocyte differentiation
GO:0061327 P anterior Malpighian tubule development
GO:0061353 P BMP signaling pathway involved in Malpighian tubule cell chemotaxis
1736 O_BomoSK11563_complete:A_BomoSK_comp12655_c0_seq1
102bp
 unnamed_protein_product_[Albugo_candida]
1737 O_BomoSK11564_complete:A_BomoSK_comp12655_c0_seq2
370bp
 PREDICTED:_decapentaplegic_isoform_X1_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001715 P ectodermal cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005125 F cytokine activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007304 P chorion-containing eggshell formation
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007378 P amnioserosa formation
GO:0007391 P dorsal closure
GO:0007393 P dorsal closure, leading edge cell fate determination
GO:0007398 P ectoderm development
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007455 P eye-antennal disc morphogenesis
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008354 P germ cell migration
GO:0008360 P regulation of cell shape
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009948 P anterior/posterior axis specification
GO:0009950 P dorsal/ventral axis specification
GO:0010002 P cardioblast differentiation
GO:0010629 P negative regulation of gene expression
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016015 F morphogen activity
GO:0017145 P stem cell division
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0030721 P spectrosome organization
GO:0035147 P branch fusion, open tracheal system
GO:0035156 P fusion cell fate specification
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035168 P larval lymph gland hemocyte differentiation
GO:0035214 P eye-antennal disc development
GO:0035215 P genital disc development
GO:0035217 P labial disc development
GO:0035222 P wing disc pattern formation
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035230 C cytoneme
GO:0035263 P genital disc sexually dimorphic development
GO:0035309 P wing and notum subfield formation
GO:0036099 P female germ-line stem cell population maintenance
GO:0040007 P growth
GO:0042078 P germ-line stem cell division
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0045476 P nurse cell apoptotic process
GO:0045570 P regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045705 P negative regulation of salivary gland boundary specification
GO:0046620 P regulation of organ growth
GO:0046843 P dorsal appendage formation
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048066 P developmental pigmentation
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048542 P lymph gland development
GO:0048619 P embryonic hindgut morphogenesis
GO:0048636 P positive regulation of muscle organ development
GO:0060323 P head morphogenesis
GO:0060395 P SMAD protein signal transduction
GO:0061320 P pericardial nephrocyte differentiation
GO:0061327 P anterior Malpighian tubule development
GO:0061353 P BMP signaling pathway involved in Malpighian tubule cell chemotaxis
1738 O_BomoSK11565_complete:A_BomoSK_comp12655_c0_seq2
116bp
 putative_benzothiadiazole-induced_S-adenosyl-L-methionine:salicylic_acid_carboxyl_methyltransferase_1_[Oryza_sativa_Japonica_Group]
1739 O_BomoSK11566_complete:A_BomoSK_comp12655_c0_seq2
111bp
 RNA_helicase_[Mobilicoccus_pelagius]
1740 O_BomoSK11567_complete:A_BomoSK_comp12655_c0_seq2
102bp
 unnamed_protein_product_[Albugo_candida]
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