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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
121 O_BomoSK10109_complete:A_BomoSK_comp12042_c0_seq2
179bp
 PREDICTED:_N-acetylgalactosaminyltransferase_7-like,_partial_[Priapulus_caudatus]
122 O_BomoSK1010_complete:A_BomoSK_comp3789_c0_seq1
104bp
 hypothetical_protein_M378DRAFT_158318_[Amanita_muscaria_Koide_BX008]
123 O_BomoSK10110_complete:A_BomoSK_comp12045_c0_seq2
396bp
 hypothetical_protein_KGM_06709_[Danaus_plexippus]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
124 O_BomoSK10111_complete:A_BomoSK_comp12045_c0_seq3
224bp
 PREDICTED:_inhibitor_of_growth_protein_3_[Amyelois_transitella]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
125 O_BomoSK10112_complete:A_BomoSK_comp12046_c0_seq1
705bp
 PREDICTED:_cell_division_cycle_protein_27_homolog,_partial_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005876 C spindle microtubule
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0019903 F protein phosphatase binding
GO:0070979 P protein K11-linked ubiquitination
126 O_BomoSK10113_3prime_partial:A_BomoSK_comp12047_c0_seq1
445bp
 PREDICTED:_ribonuclease_ZC3H12A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
127 O_BomoSK10114_complete:A_BomoSK_comp12047_c0_seq1
113bp
 PREDICTED:_tetratricopeptide_repeat_protein_6_isoform_X3_[Mustela_putorius_furo]
128 O_BomoSK10115_5prime_partial:A_BomoSK_comp12047_c0_seq1
106bp
 putative_phosphatidylinositol_kinase_[Brettanomyces_bruxellensis_AWRI1499]
129 O_BomoSK10116_3prime_partial:A_BomoSK_comp12047_c0_seq2
500bp
 PREDICTED:_ribonuclease_ZC3H12A_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
130 O_BomoSK10117_complete:A_BomoSK_comp12047_c0_seq2
113bp
 PREDICTED:_tetratricopeptide_repeat_protein_6_isoform_X3_[Mustela_putorius_furo]
131 O_BomoSK10118_5prime_partial:A_BomoSK_comp12047_c0_seq2
106bp
 putative_phosphatidylinositol_kinase_[Brettanomyces_bruxellensis_AWRI1499]
132 O_BomoSK10119_complete:A_BomoSK_comp12048_c0_seq1
231bp
 PREDICTED:_uncharacterized_protein_LOC106134324_[Amyelois_transitella]
133 O_BomoSK1011_complete:A_BomoSK_comp3790_c0_seq1
321bp
 PREDICTED:_carbonic_anhydrase_7_[Plutella_xylostella]
GO:0004089 F carbonate dehydratase activity
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016829 F lyase activity
GO:0046658 C anchored component of plasma membrane
GO:0046872 F metal ion binding
134 O_BomoSK10120_complete:A_BomoSK_comp12049_c0_seq1
225bp
 PREDICTED:_ras-related_protein_Rab-9A_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045335 C phagocytic vesicle
GO:0045921 P positive regulation of exocytosis
GO:0052405 P negative regulation by host of symbiont catalytic activity
GO:0070062 C extracellular exosome
135 O_BomoSK10121_complete:A_BomoSK_comp12051_c0_seq1
397bp
 PREDICTED:_uncharacterized_protein_LOC100862770_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0008631 P intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0022625 C cytosolic large ribosomal subunit
GO:0030687 C preribosome, large subunit precursor
GO:0033674 P positive regulation of kinase activity
GO:0042273 P ribosomal large subunit biogenesis
GO:0043065 P positive regulation of apoptotic process
GO:0043410 P positive regulation of MAPK cascade
GO:0044822 F RNA binding
GO:0046330 P positive regulation of JNK cascade
GO:0046872 F metal ion binding
136 O_BomoSK10122_complete:A_BomoSK_comp12051_c0_seq2
397bp
 PREDICTED:_uncharacterized_protein_LOC100862770_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0008631 P intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0022625 C cytosolic large ribosomal subunit
GO:0030687 C preribosome, large subunit precursor
GO:0033674 P positive regulation of kinase activity
GO:0042273 P ribosomal large subunit biogenesis
GO:0043065 P positive regulation of apoptotic process
GO:0043410 P positive regulation of MAPK cascade
GO:0044822 F RNA binding
GO:0046330 P positive regulation of JNK cascade
GO:0046872 F metal ion binding
137 O_BomoSK10123_complete:A_BomoSK_comp12054_c0_seq1
352bp
 PREDICTED:_palmitoyltransferase_ZDHHC2-like_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
138 O_BomoSK10124_complete:A_BomoSK_comp12055_c0_seq1
215bp
 PREDICTED:_dynamin-like_120_kDa_protein,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0007005 P mitochondrion organization
GO:0007007 P inner mitochondrial membrane organization
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030061 C mitochondrial crista
GO:0030425 C dendrite
139 O_BomoSK10125_3prime_partial:A_BomoSK_comp12056_c0_seq1
786bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
GO:0006366 P transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0046872 F metal ion binding
GO:0070063 F RNA polymerase binding
140 O_BomoSK10126_complete:A_BomoSK_comp12056_c0_seq1
149bp
 PREDICTED:_C-type_lectin_domain_family_4_member_F_[Canis_lupus_familiaris]
141 O_BomoSK10127_complete:A_BomoSK_comp12056_c0_seq1
134bp
 ABC_transporter_permease_[Halomonas_sp._TD01]
142 O_BomoSK10128_5prime_partial:A_BomoSK_comp12056_c0_seq1
121bp
 hypothetical_protein_[Rhodococcus_rhodnii]
143 O_BomoSK10129_complete:A_BomoSK_comp12056_c0_seq1
109bp
144 O_BomoSK1012_internal:A_BomoSK_comp3791_c0_seq2
280bp
 PREDICTED:_ribonuclease_H1_[Plutella_xylostella]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
145 O_BomoSK10130_complete:A_BomoSK_comp12058_c0_seq1
376bp
 PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
146 O_BomoSK10131_complete:A_BomoSK_comp12058_c0_seq2
440bp
 PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
147 O_BomoSK10132_complete:A_BomoSK_comp12058_c0_seq3
376bp
 PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
148 O_BomoSK10133_3prime_partial:A_BomoSK_comp12059_c0_seq1
386bp
 PREDICTED:_ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
149 O_BomoSK10134_complete:A_BomoSK_comp12059_c0_seq1
112bp
 PREDICTED:_low-density_lipoprotein_receptor-related_protein_2_[Strongylocentrotus_purpuratus]
150 O_BomoSK10135_complete:A_BomoSK_comp12060_c0_seq1
779bp
 PREDICTED:_fasciclin-2-like_isoform_X2_[Bombyx_mori]
GO:0001746 P Bolwig's organ morphogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007413 P axonal fasciculation
GO:0007528 P neuromuscular junction development
GO:0007611 P learning or memory
GO:0007612 P learning
GO:0007614 P short-term memory
GO:0008038 P neuron recognition
GO:0008045 P motor neuron axon guidance
GO:0008355 P olfactory learning
GO:0008360 P regulation of cell shape
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0031225 C anchored component of membrane
GO:0031594 C neuromuscular junction
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0036062 C presynaptic periactive zone
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045211 C postsynaptic membrane
GO:0048149 P behavioral response to ethanol
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0048786 C presynaptic active zone
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0050803 P regulation of synapse structure or activity
GO:0050808 P synapse organization
GO:0061174 C type I terminal bouton
GO:0072499 P photoreceptor cell axon guidance
GO:0072553 P terminal button organization
GO:0097482 C muscle cell postsynaptic specialization
GO:1904800 P negative regulation of neuron remodeling
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