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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10681 O_BomoSK19614_complete:A_BomoSK_comp14258_c1_seq23
104bp
10682 O_BomoSK19615_complete:A_BomoSK_comp14258_c2_seq1
286bp
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
10683 O_BomoSK19616_complete:A_BomoSK_comp14258_c2_seq1
106bp
10684 O_BomoSK19617_complete:A_BomoSK_comp14258_c3_seq1
533bp
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
10685 O_BomoSK19618_complete:A_BomoSK_comp14259_c1_seq1
299bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
10686 O_BomoSK19619_complete:A_BomoSK_comp14259_c1_seq1
192bp
10687 O_BomoSK1961_complete:A_BomoSK_comp4794_c0_seq1
371bp
 peroxisomal_biogenesis_factor_3_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003333 P amino acid transmembrane transport
GO:0005654 C nucleoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005887 C integral component of plasma membrane
GO:0007031 P peroxisome organization
GO:0008289 F lipid binding
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016557 P peroxisome membrane biogenesis
GO:0032994 C protein-lipid complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0045046 P protein import into peroxisome membrane
GO:0046983 F protein dimerization activity
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
10688 O_BomoSK19620_complete:A_BomoSK_comp14259_c1_seq1
135bp
10689 O_BomoSK19621_complete:A_BomoSK_comp14259_c1_seq2
879bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
10690 O_BomoSK19622_complete:A_BomoSK_comp14259_c1_seq2
192bp
10691 O_BomoSK19623_complete:A_BomoSK_comp14259_c1_seq2
135bp
10692 O_BomoSK19624_complete:A_BomoSK_comp14259_c1_seq2
128bp
10693 O_BomoSK19625_complete:A_BomoSK_comp14259_c1_seq2
105bp
10694 O_BomoSK19626_complete:A_BomoSK_comp14259_c1_seq3
849bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
10695 O_BomoSK19627_complete:A_BomoSK_comp14259_c1_seq3
192bp
10696 O_BomoSK19628_complete:A_BomoSK_comp14259_c1_seq3
135bp
10697 O_BomoSK19629_complete:A_BomoSK_comp14259_c1_seq3
128bp
10698 O_BomoSK1962_3prime_partial:A_BomoSK_comp4795_c0_seq1
168bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_eukaryotic_translation_initiation_factor_4_gamma_2_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0016281 C eukaryotic translation initiation factor 4F complex
10699 O_BomoSK19630_complete:A_BomoSK_comp14259_c1_seq3
105bp
10700 O_BomoSK19631_3prime_partial:A_BomoSK_comp14260_c0_seq1
378bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003878 F ATP citrate synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006085 P acetyl-CoA biosynthetic process
GO:0006101 P citrate metabolic process
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
GO:0048037 F obsolete cofactor binding
10701 O_BomoSK19632_complete:A_BomoSK_comp14260_c0_seq1
179bp
GO:0003824 F catalytic activity
GO:0003866 F 3-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009073 P aromatic amino acid family biosynthetic process
GO:0009423 P chorismate biosynthetic process
GO:0016740 F transferase activity
GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups
10702 O_BomoSK19633_complete:A_BomoSK_comp14260_c0_seq1
145bp
10703 O_BomoSK19634_complete:A_BomoSK_comp14260_c0_seq1
131bp
10704 O_BomoSK19635_5prime_partial:A_BomoSK_comp14260_c0_seq3
718bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003878 F ATP citrate synthase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0006085 P acetyl-CoA biosynthetic process
GO:0006101 P citrate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
GO:0048037 F obsolete cofactor binding
GO:0070062 C extracellular exosome
10705 O_BomoSK19636_complete:A_BomoSK_comp14260_c0_seq3
122bp
10706 O_BomoSK19637_3prime_partial:A_BomoSK_comp14260_c0_seq4
378bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003878 F ATP citrate synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006085 P acetyl-CoA biosynthetic process
GO:0006101 P citrate metabolic process
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
GO:0048037 F obsolete cofactor binding
10707 O_BomoSK19638_complete:A_BomoSK_comp14260_c0_seq4
179bp
GO:0003824 F catalytic activity
GO:0003866 F 3-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009073 P aromatic amino acid family biosynthetic process
GO:0009423 P chorismate biosynthetic process
GO:0016740 F transferase activity
GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups
10708 O_BomoSK19639_complete:A_BomoSK_comp14260_c0_seq4
145bp
10709 O_BomoSK1963_5prime_partial:A_BomoSK_comp4795_c0_seq1
117bp
10710 O_BomoSK19640_complete:A_BomoSK_comp14260_c0_seq4
131bp
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