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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10321 O_BomoSK19290_complete:A_BomoSK_comp14222_c0_seq4
119bp
10322 O_BomoSK19291_complete:A_BomoSK_comp14222_c0_seq4
117bp
10323 O_BomoSK19292_complete:A_BomoSK_comp14222_c0_seq4
102bp
10324 O_BomoSK19293_complete:A_BomoSK_comp14222_c0_seq5
1242bp
10325 O_BomoSK19294_3prime_partial:A_BomoSK_comp14222_c0_seq6
1232bp
10326 O_BomoSK19295_complete:A_BomoSK_comp14222_c0_seq7
315bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
10327 O_BomoSK19296_complete:A_BomoSK_comp14222_c0_seq7
102bp
10328 O_BomoSK19297_complete:A_BomoSK_comp14222_c0_seq8
2012bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
10329 O_BomoSK19298_complete:A_BomoSK_comp14222_c0_seq8
119bp
10330 O_BomoSK19299_complete:A_BomoSK_comp14222_c0_seq8
117bp
10331 O_BomoSK1929_complete:A_BomoSK_comp4758_c0_seq1
126bp
 roadblock_domain-containing_protein_3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005794 C Golgi apparatus
GO:0016049 P cell growth
GO:0032008 P positive regulation of TOR signaling
GO:0032947 F molecular adaptor activity
GO:0034613 P cellular protein localization
GO:0043547 P positive regulation of GTPase activity
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
10332 O_BomoSK192_internal:A_BomoSK_comp640_c0_seq1
336bp
 PREDICTED:_neuropathy_target_esterase_sws_isoform_X2_[Bombyx_mori]
GO:0004622 F lysophospholipase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006643 P membrane lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0007608 P sensory perception of smell
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0034349 P glial cell apoptotic process
GO:0045494 P photoreceptor cell maintenance
GO:0046470 P phosphatidylcholine metabolic process
GO:0051402 P neuron apoptotic process
GO:0061024 P membrane organization
10333 O_BomoSK19300_complete:A_BomoSK_comp14222_c0_seq8
102bp
10334 O_BomoSK19301_3prime_partial:A_BomoSK_comp14223_c1_seq1
682bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
10335 O_BomoSK19302_complete:A_BomoSK_comp14223_c1_seq1
336bp
10336 O_BomoSK19303_complete:A_BomoSK_comp14223_c1_seq1
100bp
10337 O_BomoSK19304_3prime_partial:A_BomoSK_comp14223_c1_seq2
696bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
10338 O_BomoSK19305_complete:A_BomoSK_comp14223_c1_seq2
336bp
10339 O_BomoSK19306_complete:A_BomoSK_comp14223_c1_seq2
100bp
10340 O_BomoSK19307_3prime_partial:A_BomoSK_comp14223_c1_seq3
575bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
10341 O_BomoSK19308_complete:A_BomoSK_comp14223_c1_seq3
336bp
10342 O_BomoSK19309_complete:A_BomoSK_comp14223_c1_seq3
100bp
10343 O_BomoSK1930_5prime_partial:A_BomoSK_comp4762_c0_seq1
499bp
 putative_selenium-binding_protein_[Danaus_plexippus]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008430 F selenium binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0050873 P brown fat cell differentiation
GO:0070062 C extracellular exosome
10344 O_BomoSK19310_complete:A_BomoSK_comp14224_c0_seq1
395bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
10345 O_BomoSK19311_complete:A_BomoSK_comp14224_c0_seq2
398bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10346 O_BomoSK19312_complete:A_BomoSK_comp14224_c0_seq2
183bp
10347 O_BomoSK19313_complete:A_BomoSK_comp14225_c0_seq2
305bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000287 F magnesium ion binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
10348 O_BomoSK19314_complete:A_BomoSK_comp14226_c0_seq3
486bp
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008887 F glycerate kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
10349 O_BomoSK19315_complete:A_BomoSK_comp14226_c0_seq5
486bp
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008887 F glycerate kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0061624 P fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate
10350 O_BomoSK19316_3prime_partial:A_BomoSK_comp14227_c0_seq1
866bp
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