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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1021 O_BomoSK1091_complete:A_BomoSK_comp3875_c0_seq1
320bp
 cell_division_cycle_2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007284 P spermatogonial cell division
GO:0008315 P G2/MI transition of meiotic cell cycle
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0030707 P ovarian follicle cell development
GO:0032880 P regulation of protein localization
GO:0044818 P mitotic G2/M transition checkpoint
GO:0048142 P germarium-derived cystoblast division
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055059 P asymmetric neuroblast division
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
1022 O_BomoSK10920_complete:A_BomoSK_comp12438_c0_seq1
247bp
 PREDICTED:_dolichyl-phosphate_mannosyltransferase_isoform_X1_[Bombyx_mori]
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0004582 F dolichyl-phosphate beta-D-mannosyltransferase activity
GO:0005515 F protein binding
GO:0005537 F mannose binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0019348 P dolichol metabolic process
GO:0019673 P GDP-mannose metabolic process
GO:0033185 C dolichol-phosphate-mannose synthase complex
GO:0035268 P protein mannosylation
GO:0035269 P protein O-linked mannosylation
GO:0043178 F alcohol binding
GO:0043231 C intracellular membrane-bounded organelle
1023 O_BomoSK10921_3prime_partial:A_BomoSK_comp12439_c0_seq1
274bp
 PREDICTED:_sorting_nexin-2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042995 C cell projection
GO:0072673 P lamellipodium morphogenesis
1024 O_BomoSK10922_complete:A_BomoSK_comp12439_c0_seq1
154bp
1025 O_BomoSK10923_3prime_partial:A_BomoSK_comp12439_c0_seq2
274bp
 PREDICTED:_sorting_nexin-2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042995 C cell projection
GO:0072673 P lamellipodium morphogenesis
1026 O_BomoSK10924_complete:A_BomoSK_comp12439_c0_seq2
154bp
1027 O_BomoSK10925_complete:A_BomoSK_comp12442_c0_seq1
761bp
 PREDICTED:_dol-P-Man:Man(7)GlcNAc(2)-PP-Dol_alpha-1,6-mannosyltransferase_[Amyelois_transitella]
GO:0000009 F alpha-1,6-mannosyltransferase activity
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0052917 F dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase
GO:0097502 P mannosylation
1028 O_BomoSK10926_complete:A_BomoSK_comp12442_c0_seq1
100bp
 asparagine-linked_glycosylation_12_homolog_(yeast,_alpha-1,6-mannosyltransferase),_isoform_CRA_a_[Mus_musculus]
1029 O_BomoSK10927_complete:A_BomoSK_comp12443_c0_seq2
373bp
 PREDICTED:_very-long-chain_(3R)-3-hydroxyacyl-CoA_dehydratase_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0018812 F 3-hydroxyacyl-CoA dehydratase activity
GO:0030497 P fatty acid elongation
GO:0042761 P very long-chain fatty acid biosynthetic process
1030 O_BomoSK10928_5prime_partial:A_BomoSK_comp12444_c0_seq1
227bp
 PREDICTED:_serine/threonine-protein_kinase_unc-51_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008340 P determination of adult lifespan
GO:0008361 P regulation of cell size
GO:0009792 P embryo development ending in birth or egg hatching
GO:0012501 P programmed cell death
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030516 P regulation of axon extension
GO:0032880 P regulation of protein localization
GO:0040014 P regulation of multicellular organism growth
GO:0040024 P dauer larval development
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043277 P apoptotic cell clearance
GO:0045138 P nematode male tail tip morphogenesis
GO:0046777 P protein autophosphorylation
1031 O_BomoSK10929_complete:A_BomoSK_comp12445_c0_seq1
180bp
 PREDICTED:_apoptosis-linked_protein_2_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0010595 P positive regulation of endothelial cell migration
GO:0016020 C membrane
GO:0030948 P negative regulation of vascular endothelial growth factor receptor signaling pathway
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0032007 P negative regulation of TOR signaling
GO:0034605 P cellular response to heat
GO:0036324 P vascular endothelial growth factor receptor-2 signaling pathway
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043495 F protein-membrane adaptor activity
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
GO:0048306 F calcium-dependent protein binding
GO:0051592 P response to calcium ion
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060090 F molecular adaptor activity
GO:0070062 C extracellular exosome
GO:0070971 C endoplasmic reticulum exit site
1032 O_BomoSK1092_3prime_partial:A_BomoSK_comp3876_c0_seq1
1543bp
 PREDICTED:_probable_GPI-anchored_adhesin-like_protein_PGA55_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
1033 O_BomoSK10930_complete:A_BomoSK_comp12445_c0_seq1
111bp
1034 O_BomoSK10931_complete:A_BomoSK_comp12445_c0_seq2
178bp
 apoptosis-linked_protein_2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0010595 P positive regulation of endothelial cell migration
GO:0016020 C membrane
GO:0030948 P negative regulation of vascular endothelial growth factor receptor signaling pathway
GO:0031410 C cytoplasmic vesicle
GO:0031965 C nuclear membrane
GO:0032007 P negative regulation of TOR signaling
GO:0034605 P cellular response to heat
GO:0036324 P vascular endothelial growth factor receptor-2 signaling pathway
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043495 F protein-membrane adaptor activity
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
GO:0048306 F calcium-dependent protein binding
GO:0051592 P response to calcium ion
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060090 F molecular adaptor activity
GO:0070062 C extracellular exosome
GO:0070971 C endoplasmic reticulum exit site
1035 O_BomoSK10932_complete:A_BomoSK_comp12445_c0_seq2
111bp
1036 O_BomoSK10933_complete:A_BomoSK_comp12446_c0_seq1
813bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX23_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000354 P cis assembly of pre-catalytic spliceosome
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
1037 O_BomoSK10934_complete:A_BomoSK_comp12446_c0_seq1
217bp
 uncharacterized_protein_BN745_02520_[Klebsiella_variicola_CAG:634]
1038 O_BomoSK10935_complete:A_BomoSK_comp12446_c0_seq1
131bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX23_isoform_X2_[Callithrix_jacchus]
1039 O_BomoSK10936_5prime_partial:A_BomoSK_comp12447_c0_seq1
225bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
1040 O_BomoSK10937_3prime_partial:A_BomoSK_comp12448_c0_seq1
328bp
 PREDICTED:_solute_carrier_family_35_member_F5_isoform_X2_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1041 O_BomoSK10938_complete:A_BomoSK_comp12448_c0_seq1
104bp
1042 O_BomoSK10939_complete:A_BomoSK_comp12448_c0_seq2
100bp
 PREDICTED:_solute_carrier_family_35_member_F5_isoform_X2_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1043 O_BomoSK1093_complete:A_BomoSK_comp3876_c0_seq1
129bp
 CRISPR-associated_protein_Cas4_[Pannonibacter_phragmitetus]
1044 O_BomoSK10940_3prime_partial:A_BomoSK_comp12448_c0_seq3
332bp
 PREDICTED:_solute_carrier_family_35_member_F5_isoform_X1_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1045 O_BomoSK10941_complete:A_BomoSK_comp12448_c0_seq3
108bp
1046 O_BomoSK10942_complete:A_BomoSK_comp12449_c0_seq1
376bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0291608_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000188 P obsolete inactivation of MAPK activity
GO:0003714 F transcription corepressor activity
GO:0005095 F GTPase inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0017053 C transcription repressor complex
GO:0034260 P negative regulation of GTPase activity
GO:0046329 P negative regulation of JNK cascade
1047 O_BomoSK10943_complete:A_BomoSK_comp12449_c0_seq1
109bp
 PREDICTED:_platelet_endothelial_aggregation_receptor_1_isoform_X2_[Rattus_norvegicus]
1048 O_BomoSK10944_complete:A_BomoSK_comp12449_c0_seq1
105bp
1049 O_BomoSK10945_5prime_partial:A_BomoSK_comp12449_c0_seq2
401bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0291608_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000188 P obsolete inactivation of MAPK activity
GO:0003714 F transcription corepressor activity
GO:0005095 F GTPase inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0017053 C transcription repressor complex
GO:0034260 P negative regulation of GTPase activity
GO:0046329 P negative regulation of JNK cascade
1050 O_BomoSK10946_complete:A_BomoSK_comp12449_c0_seq2
109bp
 PREDICTED:_platelet_endothelial_aggregation_receptor_1_isoform_X2_[Rattus_norvegicus]
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