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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10081 O_BomoSK19074_complete:A_BomoSK_comp14198_c0_seq10
103bp
10082 O_BomoSK19075_complete:A_BomoSK_comp14198_c0_seq11
246bp
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
10083 O_BomoSK19076_complete:A_BomoSK_comp14198_c0_seq12
246bp
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
10084 O_BomoSK19077_3prime_partial:A_BomoSK_comp14200_c0_seq1
558bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10085 O_BomoSK19078_5prime_partial:A_BomoSK_comp14200_c0_seq1
142bp
10086 O_BomoSK19079_complete:A_BomoSK_comp14201_c0_seq1
248bp
10087 O_BomoSK1907_complete:A_BomoSK_comp4726_c0_seq1
274bp
 PREDICTED:_nuclear_RNA_export_factor_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
10088 O_BomoSK19080_complete:A_BomoSK_comp14201_c0_seq1
127bp
10089 O_BomoSK19081_complete:A_BomoSK_comp14201_c0_seq1
101bp
10090 O_BomoSK19082_complete:A_BomoSK_comp14201_c0_seq4
624bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10091 O_BomoSK19083_complete:A_BomoSK_comp14201_c0_seq4
103bp
10092 O_BomoSK19084_3prime_partial:A_BomoSK_comp14202_c1_seq1
207bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10093 O_BomoSK19085_complete:A_BomoSK_comp14202_c3_seq3
273bp
10094 O_BomoSK19086_complete:A_BomoSK_comp14202_c3_seq3
118bp
10095 O_BomoSK19087_5prime_partial:A_BomoSK_comp14202_c4_seq1
228bp
10096 O_BomoSK19088_5prime_partial:A_BomoSK_comp14202_c4_seq2
228bp
10097 O_BomoSK19089_5prime_partial:A_BomoSK_comp14202_c4_seq3
228bp
10098 O_BomoSK1908_complete:A_BomoSK_comp4726_c0_seq1
206bp
 PREDICTED:_nuclear_RNA_export_factor_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016032 P viral process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0042405 C nuclear inclusion body
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
10099 O_BomoSK19090_5prime_partial:A_BomoSK_comp14202_c4_seq4
105bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
10100 O_BomoSK19091_5prime_partial:A_BomoSK_comp14202_c4_seq5
359bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
10101 O_BomoSK19092_5prime_partial:A_BomoSK_comp14202_c4_seq5
228bp
10102 O_BomoSK19093_5prime_partial:A_BomoSK_comp14202_c4_seq6
228bp
10103 O_BomoSK19094_complete:A_BomoSK_comp14202_c5_seq1
454bp
GO:0005737 C cytoplasm
10104 O_BomoSK19095_complete:A_BomoSK_comp14202_c5_seq1
144bp
10105 O_BomoSK19096_complete:A_BomoSK_comp14202_c5_seq1
112bp
10106 O_BomoSK19097_complete:A_BomoSK_comp14202_c5_seq2
195bp
GO:0005737 C cytoplasm
10107 O_BomoSK19098_complete:A_BomoSK_comp14202_c5_seq2
144bp
10108 O_BomoSK19099_complete:A_BomoSK_comp14202_c5_seq2
112bp
10109 O_BomoSK1909_5prime_partial:A_BomoSK_comp4734_c0_seq1
158bp
 PREDICTED:_DNA_ligase_4-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260 P DNA replication
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0032807 C DNA ligase IV complex
GO:0033152 P immunoglobulin V(D)J recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070419 C nonhomologous end joining complex
GO:0071897 P DNA biosynthetic process
10110 O_BomoSK190_5prime_partial:A_BomoSK_comp637_c0_seq1
111bp
 Lipase_[Operophtera_brumata]
GO:0004806 F triglyceride lipase activity
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
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