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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
841 O_BomoN4EE10758_5prime_partial:A_BomoN4EE_TR28542_c0_g1_i1
126bp
 putative_DNA-directed_RNA_polymerase_II_largest_subunit_[Danaus_plexippus]
842 O_BomoN4EE10759_internal:A_BomoN4EE_TR28542_c0_g2_i1
340bp
 PREDICTED:_uncharacterized_protein_LOC106135963_[Amyelois_transitella]
843 O_BomoN4EE1075_internal:A_BomoN4EE_TR14551_c0_g1_i1
178bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_multidrug_resistance-associated_protein_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006979 P response to oxidative stress
GO:0008152 P metabolic process
GO:0008514 F organic anion transmembrane transporter activity
GO:0009408 P response to heat
GO:0009986 C cell surface
GO:0015127 F bilirubin transmembrane transporter activity
GO:0015723 P bilirubin transport
GO:0015732 P prostaglandin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0019904 F protein domain specific binding
GO:0030644 P cellular chloride ion homeostasis
GO:0031427 P response to methotrexate
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0043627 P response to estrogen
GO:0046581 C intercellular canaliculus
GO:0046685 P response to arsenic-containing substance
GO:0048545 P response to steroid hormone
GO:0055085 P transmembrane transport
GO:0070327 P thyroid hormone transport
GO:0098656 P anion transmembrane transport
844 O_BomoN4EE10760_complete:A_BomoN4EE_TR28549_c0_g1_i1
128bp
 PREDICTED:_chemosensory_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007552 P metamorphosis
GO:0007610 P behavior
GO:0009615 P response to virus
GO:0045297 P obsolete post-mating behavior
845 O_BomoN4EE10761_5prime_partial:A_BomoN4EE_TR28549_c0_g2_i1
150bp
 PREDICTED:_chemosensory_protein_isoform_X1_[Bombyx_mori]
GO:0005549 F odorant binding
GO:0005550 F pheromone binding
GO:0005576 C extracellular region
846 O_BomoN4EE10762_complete:A_BomoN4EE_TR28571_c0_g1_i1
1051bp
 PREDICTED:_replication_factor_C_subunit_1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
847 O_BomoN4EE10763_complete:A_BomoN4EE_TR28571_c0_g1_i1
108bp
848 O_BomoN4EE10764_complete:A_BomoN4EE_TR28573_c0_g1_i1
169bp
 PREDICTED:_collagen_and_calcium-binding_EGF_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0001525 P angiogenesis
GO:0001946 P lymphangiogenesis
GO:0002020 F protease binding
GO:0002040 P sprouting angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005615 C extracellular space
GO:0007275 P multicellular organism development
GO:0010575 P positive regulation of vascular endothelial growth factor production
GO:0010595 P positive regulation of endothelial cell migration
GO:0010954 P positive regulation of protein processing
GO:0045766 P positive regulation of angiogenesis
GO:0048845 P venous blood vessel morphogenesis
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
GO:1901492 P positive regulation of lymphangiogenesis
849 O_BomoN4EE10765_complete:A_BomoN4EE_TR28573_c0_g2_i1
437bp
 PREDICTED:_collagen_and_calcium-binding_EGF_domain-containing_protein_1-like_[Papilio_xuthus]
GO:0001525 P angiogenesis
GO:0001946 P lymphangiogenesis
GO:0002040 P sprouting angiogenesis
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005581 C collagen trimer
GO:0007275 P multicellular organism development
GO:0038084 P vascular endothelial growth factor signaling pathway
GO:0048514 P blood vessel morphogenesis
GO:0048845 P venous blood vessel morphogenesis
GO:0060855 P venous endothelial cell migration involved in lymph vessel development
850 O_BomoN4EE10766_complete:A_BomoN4EE_TR28574_c0_g1_i1
205bp
 PREDICTED:_uncharacterized_protein_LOC106142705_[Amyelois_transitella]
851 O_BomoN4EE10767_complete:A_BomoN4EE_TR28574_c0_g1_i1
107bp
852 O_BomoN4EE10768_complete:A_BomoN4EE_TR28576_c0_g1_i1
486bp
 hypothetical_protein_KGM_18427_[Danaus_plexippus]
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
853 O_BomoN4EE10769_5prime_partial:A_BomoN4EE_TR28589_c0_g1_i1
367bp
 PREDICTED:_uncharacterized_protein_LOC100862793_isoform_X1_[Bombyx_mori]
854 O_BomoN4EE1076_5prime_partial:A_BomoN4EE_TR14588_c0_g1_i1
103bp
 PREDICTED:_uncharacterized_protein_LOC105841595_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
855 O_BomoN4EE10770_5prime_partial:A_BomoN4EE_TR28589_c0_g2_i1
343bp
 PREDICTED:_uncharacterized_protein_LOC100862793_isoform_X2_[Bombyx_mori]
856 O_BomoN4EE10771_5prime_partial:A_BomoN4EE_TR28592_c0_g1_i1
333bp
 PREDICTED:_LIM_domain_kinase_1_[Bombyx_mori]
857 O_BomoN4EE10772_internal:A_BomoN4EE_TR28593_c0_g1_i1
106bp
 PREDICTED:_trypsin_alpha-3-like_[Papilio_polytes]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
858 O_BomoN4EE10773_internal:A_BomoN4EE_TR28593_c0_g1_i1
106bp
859 O_BomoN4EE10774_complete:A_BomoN4EE_TR28617_c0_g2_i1
342bp
 L-threonine_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0006567 P threonine catabolic process
GO:0008743 F L-threonine 3-dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0019518 P L-threonine catabolic process to glycine
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
860 O_BomoN4EE10775_5prime_partial:A_BomoN4EE_TR28627_c0_g1_i1
112bp
 PREDICTED:_coiled-coil-helix-coiled-coil-helix_domain-containing_protein_10,_mitochondrial-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006119 P oxidative phosphorylation
GO:0006754 P ATP biosynthetic process
GO:0007005 P mitochondrion organization
GO:2000984 P negative regulation of ATP citrate synthase activity
861 O_BomoN4EE10776_internal:A_BomoN4EE_TR28636_c0_g1_i1
130bp
 PREDICTED:_glycerophosphodiester_phosphodiesterase_GDPD6-like_isoform_X2_[Amyelois_transitella]
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
862 O_BomoN4EE10777_3prime_partial:A_BomoN4EE_TR28636_c0_g1_i1
107bp
 hypothetical_protein_[Microvirga_sp._JC119]
863 O_BomoN4EE10778_5prime_partial:A_BomoN4EE_TR28662_c0_g1_i1
329bp
 PREDICTED:_transcription_initiation_factor_IIB_[Amyelois_transitella]
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
864 O_BomoN4EE10779_internal:A_BomoN4EE_TR28663_c0_g1_i1
139bp
 cuticular_protein_RR-2_motif_139_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008010 F structural constituent of chitin-based larval cuticle
GO:0008061 F chitin binding
GO:0008150 P biological_process
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0031012 C extracellular matrix
GO:0032992 C protein-carbohydrate complex
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
865 O_BomoN4EE1077_internal:A_BomoN4EE_TR14604_c0_g1_i1
182bp
 PREDICTED:_centrosomal_protein_of_290_kDa-like_[Amyelois_transitella]
866 O_BomoN4EE10780_complete:A_BomoN4EE_TR28670_c0_g1_i1
242bp
 PREDICTED:_39S_ribosomal_protein_L19,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
867 O_BomoN4EE10781_complete:A_BomoN4EE_TR28670_c0_g2_i1
306bp
 PREDICTED:_39S_ribosomal_protein_L19,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
868 O_BomoN4EE10782_complete:A_BomoN4EE_TR28675_c0_g1_i1
372bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SINA-like_10_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
869 O_BomoN4EE10783_5prime_partial:A_BomoN4EE_TR28680_c0_g1_i1
158bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015939 P pantothenate metabolic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0031325 P positive regulation of cellular metabolic process
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
870 O_BomoN4EE10784_3prime_partial:A_BomoN4EE_TR28680_c0_g1_i1
107bp
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