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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3631 O_BomoN4EE13269_5prime_partial:A_BomoN4EE_TR30594_c0_g1_i2
192bp
 hypothetical_protein_RR46_04068_[Papilio_xuthus]
3632 O_BomoN4EE1326_complete:A_BomoN4EE_TR18379_c0_g2_i1
136bp
 PREDICTED:_short_coiled-coil_protein_homolog_[Papilio_polytes]
GO:0000139 C Golgi membrane
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016020 C membrane
3633 O_BomoN4EE13270_5prime_partial:A_BomoN4EE_TR30594_c0_g2_i1
138bp
3634 O_BomoN4EE13271_5prime_partial:A_BomoN4EE_TR30594_c0_g2_i1
115bp
3635 O_BomoN4EE13272_5prime_partial:A_BomoN4EE_TR30594_c0_g2_i2
166bp
 PREDICTED:_uncharacterized_protein_LOC101860531_isoform_X1_[Aplysia_californica]
3636 O_BomoN4EE13273_5prime_partial:A_BomoN4EE_TR30594_c0_g2_i2
143bp
3637 O_BomoN4EE13274_complete:A_BomoN4EE_TR30594_c1_g2_i1
137bp
 PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3638 O_BomoN4EE13275_complete:A_BomoN4EE_TR30594_c1_g2_i1
113bp
 PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3639 O_BomoN4EE13276_3prime_partial:A_BomoN4EE_TR30594_c1_g2_i2
386bp
 PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3640 O_BomoN4EE13277_3prime_partial:A_BomoN4EE_TR30594_c1_g3_i1
219bp
 gag-like_protein_[Bombyx_mori]
3641 O_BomoN4EE13278_5prime_partial:A_BomoN4EE_TR30594_c1_g3_i1
101bp
3642 O_BomoN4EE13279_3prime_partial:A_BomoN4EE_TR30594_c1_g3_i2
219bp
 gag-like_protein_[Bombyx_mori]
3643 O_BomoN4EE1327_complete:A_BomoN4EE_TR18380_c0_g1_i1
174bp
 PREDICTED:_AN1-type_zinc_finger_protein_6_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0071356 P cellular response to tumor necrosis factor
3644 O_BomoN4EE13280_5prime_partial:A_BomoN4EE_TR30594_c1_g3_i2
101bp
3645 O_BomoN4EE13281_complete:A_BomoN4EE_TR30595_c1_g1_i1
733bp
 PREDICTED:_semaphorin-2A-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
3646 O_BomoN4EE13282_complete:A_BomoN4EE_TR30595_c1_g1_i2
733bp
 PREDICTED:_semaphorin-2A-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
3647 O_BomoN4EE13283_complete:A_BomoN4EE_TR30595_c2_g1_i1
719bp
 PREDICTED:_uncharacterized_protein_LOC106142516_isoform_X2_[Amyelois_transitella]
3648 O_BomoN4EE13284_5prime_partial:A_BomoN4EE_TR30595_c2_g1_i2
428bp
 PREDICTED:_uncharacterized_protein_LOC105396231_[Plutella_xylostella]
3649 O_BomoN4EE13285_5prime_partial:A_BomoN4EE_TR30595_c2_g1_i3
428bp
 PREDICTED:_uncharacterized_protein_LOC105396231_[Plutella_xylostella]
3650 O_BomoN4EE13286_complete:A_BomoN4EE_TR30596_c0_g1_i1
112bp
 PREDICTED:_period_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3651 O_BomoN4EE13287_complete:A_BomoN4EE_TR30596_c0_g2_i1
1061bp
 PREDICTED:_period_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3652 O_BomoN4EE13288_complete:A_BomoN4EE_TR30596_c0_g2_i3
1013bp
 PERIOD_beta_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3653 O_BomoN4EE13289_complete:A_BomoN4EE_TR30596_c0_g2_i4
1104bp
 PERIOD_beta_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3654 O_BomoN4EE1328_complete:A_BomoN4EE_TR18380_c0_g1_i2
174bp
 PREDICTED:_AN1-type_zinc_finger_protein_6_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0071356 P cellular response to tumor necrosis factor
3655 O_BomoN4EE13290_complete:A_BomoN4EE_TR30596_c0_g2_i5
1013bp
 PERIOD_beta_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3656 O_BomoN4EE13291_complete:A_BomoN4EE_TR30596_c0_g2_i6
1152bp
 PREDICTED:_period_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
3657 O_BomoN4EE13292_complete:A_BomoN4EE_TR30596_c0_g3_i1
1661bp
 PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA1_[Papilio_xuthus]
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0008270 F zinc ion binding
GO:0009303 P rRNA transcription
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
3658 O_BomoN4EE13293_complete:A_BomoN4EE_TR30596_c0_g3_i1
155bp
3659 O_BomoN4EE13294_complete:A_BomoN4EE_TR30596_c0_g3_i1
105bp
3660 O_BomoN4EE13295_complete:A_BomoN4EE_TR30597_c0_g1_i7
707bp
 PREDICTED:_tyrosine-protein_phosphatase_CDC14_homolog_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0007096 P regulation of exit from mitosis
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008283 P cell population proliferation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042384 P cilium assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051301 P cell division
GO:0071850 P regulation of cell cycle
GO:0072686 C mitotic spindle
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