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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
361 O_BomoN4EE10325_complete:A_BomoN4EE_TR28410_c1_g1_i7
145bp
362 O_BomoN4EE10326_complete:A_BomoN4EE_TR28410_c1_g1_i7
122bp
 Endonuclease-reverse_transcriptase,_partial_[Operophtera_brumata]
363 O_BomoN4EE10327_complete:A_BomoN4EE_TR28410_c1_g1_i7
107bp
364 O_BomoN4EE10328_complete:A_BomoN4EE_TR28410_c1_g1_i8
808bp
 PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
365 O_BomoN4EE10329_complete:A_BomoN4EE_TR28410_c1_g1_i8
664bp
 PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
366 O_BomoN4EE1032_complete:A_BomoN4EE_TR13987_c0_g1_i1
384bp
 PREDICTED:_p21-activated_protein_kinase-interacting_protein_1-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0009968 P negative regulation of signal transduction
367 O_BomoN4EE10330_complete:A_BomoN4EE_TR28410_c1_g1_i8
160bp
368 O_BomoN4EE10331_complete:A_BomoN4EE_TR28410_c1_g1_i8
145bp
369 O_BomoN4EE10332_complete:A_BomoN4EE_TR28410_c1_g1_i8
122bp
 Endonuclease-reverse_transcriptase,_partial_[Operophtera_brumata]
370 O_BomoN4EE10333_complete:A_BomoN4EE_TR28410_c1_g1_i8
107bp
371 O_BomoN4EE10334_complete:A_BomoN4EE_TR28412_c2_g2_i1
139bp
 hypothetical_protein_KGM_14562_[Danaus_plexippus]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
372 O_BomoN4EE10335_complete:A_BomoN4EE_TR28412_c2_g2_i1
116bp
373 O_BomoN4EE10336_complete:A_BomoN4EE_TR28412_c2_g2_i2
256bp
 PREDICTED:_DNA_repair_protein_complementing_XP-A_cells_homolog_[Papilio_machaon]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
374 O_BomoN4EE10337_complete:A_BomoN4EE_TR28412_c2_g2_i2
182bp
375 O_BomoN4EE10338_complete:A_BomoN4EE_TR28412_c2_g2_i2
109bp
376 O_BomoN4EE10339_3prime_partial:A_BomoN4EE_TR28413_c0_g1_i1
402bp
 PREDICTED:_ikaros_family_zinc_finger_protein_isoform_X2_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
377 O_BomoN4EE1033_internal:A_BomoN4EE_TR13995_c0_g1_i1
163bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
378 O_BomoN4EE10340_complete:A_BomoN4EE_TR28413_c0_g1_i1
117bp
379 O_BomoN4EE10341_complete:A_BomoN4EE_TR28413_c0_g2_i1
474bp
 PREDICTED:_ikaros_family_zinc_finger_protein_isoform_X2_[Papilio_xuthus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007498 P mesoderm development
GO:0016568 P chromatin organization
GO:0030098 P lymphocyte differentiation
GO:0030218 P erythrocyte differentiation
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
380 O_BomoN4EE10342_complete:A_BomoN4EE_TR28413_c0_g2_i1
163bp
381 O_BomoN4EE10343_complete:A_BomoN4EE_TR28413_c0_g2_i1
117bp
382 O_BomoN4EE10344_complete:A_BomoN4EE_TR28414_c0_g2_i1
147bp
 Peptidoglycan-recognition_protein-LF_[Operophtera_brumata]
GO:0002376 P immune system process
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0009617 P response to bacterium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019731 P antibacterial humoral response
GO:0031240 C external side of cell outer membrane
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0098542 P defense response to other organism
383 O_BomoN4EE10345_complete:A_BomoN4EE_TR28414_c0_g2_i3
243bp
 PREDICTED:_uncharacterized_protein_LOC101742555_isoform_X2_[Bombyx_mori]
384 O_BomoN4EE10346_complete:A_BomoN4EE_TR28414_c0_g2_i4
376bp
 PREDICTED:_uncharacterized_protein_LOC101742555_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0009617 P response to bacterium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019731 P antibacterial humoral response
GO:0031240 C external side of cell outer membrane
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0098542 P defense response to other organism
385 O_BomoN4EE10347_complete:A_BomoN4EE_TR28414_c0_g2_i5
376bp
 PREDICTED:_uncharacterized_protein_LOC101742555_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0009617 P response to bacterium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019731 P antibacterial humoral response
GO:0031240 C external side of cell outer membrane
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0098542 P defense response to other organism
386 O_BomoN4EE10348_complete:A_BomoN4EE_TR28416_c0_g1_i1
1175bp
 PREDICTED:_protein_retinal_degeneration_B_[Amyelois_transitella]
GO:0005388 F P-type calcium transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007603 P phototransduction, visible light
GO:0007608 P sensory perception of smell
GO:0008525 F phosphatidylcholine transporter activity
GO:0008526 F phosphatidylinositol transfer activity
GO:0015914 P phospholipid transport
GO:0016021 C integral component of membrane
GO:0016029 C subrhabdomeral cisterna
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0035091 F phosphatidylinositol binding
GO:0045494 P photoreceptor cell maintenance
GO:0046488 P phosphatidylinositol metabolic process
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0070588 P calcium ion transmembrane transport
GO:0071482 P cellular response to light stimulus
387 O_BomoN4EE10349_complete:A_BomoN4EE_TR28417_c0_g3_i4
113bp
388 O_BomoN4EE1034_complete:A_BomoN4EE_TR14007_c0_g1_i1
101bp
389 O_BomoN4EE10350_internal:A_BomoN4EE_TR28417_c0_g3_i6
113bp
390 O_BomoN4EE10351_5prime_partial:A_BomoN4EE_TR28417_c0_g3_i7
124bp
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