Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3391	O_BomoN4EE13052_complete:A_BomoN4EE_TR30582_c6_g1_i5 462bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3392	O_BomoN4EE13053_complete:A_BomoN4EE_TR30582_c6_g1_i5 150bp	Bomo_Chr8
3393	O_BomoN4EE13054_complete:A_BomoN4EE_TR30582_c6_g1_i5 123bp	Bomo_Chr8	PREDICTED:_uncharacterized_protein_LOC101735994_[Bombyx_mori]
3394	O_BomoN4EE13055_complete:A_BomoN4EE_TR30582_c6_g1_i6 354bp	Bomo_Chr14	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
3395	O_BomoN4EE13056_complete:A_BomoN4EE_TR30582_c6_g1_i6 136bp	Bomo_Chr14	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3396	O_BomoN4EE13057_complete:A_BomoN4EE_TR30582_c6_g1_i6 105bp	Bomo_Chr14
3397	O_BomoN4EE13058_complete:A_BomoN4EE_TR30582_c6_g1_i6 101bp	Bomo_Chr14
3398	O_BomoN4EE13059_complete:A_BomoN4EE_TR30582_c6_g1_i7 136bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3399	O_BomoN4EE1305_internal:A_BomoN4EE_TR17961_c0_g1_i1 132bp	Bomo_Chr4	PREDICTED:_neither_inactivation_nor_afterpotential_protein_C_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0003774 F cytoskeletal motor activity GO:0003779 F actin binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity GO:0004713 F protein tyrosine kinase activity GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005875 C microtubule associated complex GO:0006468 P protein phosphorylation GO:0006886 P intracellular protein transport GO:0007010 P cytoskeleton organization GO:0007601 P visual perception GO:0007603 P phototransduction, visible light GO:0007604 P phototransduction, UV GO:0008104 P protein localization GO:0009416 P response to light stimulus GO:0016027 C inaD signaling complex GO:0016028 C rhabdomere GO:0016059 P deactivation of rhodopsin mediated signaling GO:0016062 P adaptation of rhodopsin mediated signaling GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016459 C myosin complex GO:0016461 C unconventional myosin complex GO:0016740 F transferase activity GO:0018108 P peptidyl-tyrosine phosphorylation GO:0023014 P signal transduction GO:0033227 P dsRNA transport GO:0035091 F phosphatidylinositol binding GO:0042385 C myosin III complex GO:0042623 F ATP hydrolysis activity GO:0045494 P photoreceptor cell maintenance GO:0050896 P response to stimulus GO:1990146 P protein localization to rhabdomere
3400	O_BomoN4EE13060_complete:A_BomoN4EE_TR30582_c6_g1_i8 154bp	Bomo_Chr8	PREDICTED:_uncharacterized_protein_LOC101735994_[Bombyx_mori]
3401	O_BomoN4EE13061_5prime_partial:A_BomoN4EE_TR30582_c6_g1_i8 102bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
3402	O_BomoN4EE13062_complete:A_BomoN4EE_TR30582_c6_g1_i9 129bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
3403	O_BomoN4EE13063_complete:A_BomoN4EE_TR30582_c6_g1_i9 124bp	Bomo_Chr8
3404	O_BomoN4EE13064_5prime_partial:A_BomoN4EE_TR30582_c6_g1_i10 102bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
3405	O_BomoN4EE13065_complete:A_BomoN4EE_TR30582_c6_g1_i12 194bp	Bomo_Chr8	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3406	O_BomoN4EE13066_complete:A_BomoN4EE_TR30582_c6_g1_i12 144bp	Bomo_Chr8
3407	O_BomoN4EE13067_complete:A_BomoN4EE_TR30582_c6_g1_i13 354bp	Bomo_Chr25	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
3408	O_BomoN4EE13068_complete:A_BomoN4EE_TR30582_c6_g1_i13 136bp	Bomo_Chr25	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3409	O_BomoN4EE13069_complete:A_BomoN4EE_TR30582_c6_g1_i13 117bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC101735994_[Bombyx_mori]
3410	O_BomoN4EE1306_internal:A_BomoN4EE_TR17965_c0_g1_i1 199bp	Bomo_Chr25	PREDICTED:_chlorophyllide_A_binding_protein_isoform_X2_[Bombyx_mori]	GO:0000302 P response to reactive oxygen species GO:0001525 P angiogenesis GO:0005215 F transporter activity GO:0005319 F lipid transporter activity GO:0005515 F protein binding GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005622 C intracellular anatomical structure GO:0005783 C endoplasmic reticulum GO:0006006 P glucose metabolic process GO:0006629 P lipid metabolic process GO:0006810 P transport GO:0006869 P lipid transport GO:0007420 P brain development GO:0007568 P aging GO:0008289 F lipid binding GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway GO:0014012 P peripheral nervous system axon regeneration GO:0015485 F cholesterol binding GO:0022626 C cytosolic ribosome GO:0030425 C dendrite GO:0036094 F small molecule binding GO:0042246 P tissue regeneration GO:0042308 P negative regulation of protein import into nucleus GO:0042493 P response to xenobiotic stimulus GO:0043025 C neuronal cell body GO:0048471 C perinuclear region of cytoplasm GO:0048662 P negative regulation of smooth muscle cell proliferation GO:0048678 P response to axon injury GO:0051895 P negative regulation of focal adhesion assembly GO:0060588 P negative regulation of lipoprotein lipid oxidation GO:0070062 C extracellular exosome GO:0071638 P negative regulation of monocyte chemotactic protein-1 production GO:1900016 P negative regulation of cytokine production involved in inflammatory response GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion GO:2000405 P negative regulation of T cell migration
3411	O_BomoN4EE13070_complete:A_BomoN4EE_TR30582_c6_g1_i13 105bp	Bomo_Chr25
3412	O_BomoN4EE13071_complete:A_BomoN4EE_TR30582_c6_g1_i13 102bp	Bomo_Chr25
3413	O_BomoN4EE13072_complete:A_BomoN4EE_TR30582_c6_g1_i13 101bp	Bomo_Chr25
3414	O_BomoN4EE13073_complete:A_BomoN4EE_TR30582_c6_g1_i15 194bp	Bomo_Chr25	PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]	GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0048471 C perinuclear region of cytoplasm
3415	O_BomoN4EE13074_complete:A_BomoN4EE_TR30582_c6_g1_i15 154bp	Bomo_Chr25	PREDICTED:_uncharacterized_protein_LOC101735994_[Bombyx_mori]
3416	O_BomoN4EE13075_complete:A_BomoN4EE_TR30582_c6_g1_i15 144bp	Bomo_Chr25
3417	O_BomoN4EE13076_complete:A_BomoN4EE_TR30584_c0_g1_i1 222bp	Bomo_Chr27	PREDICTED:_uncharacterized_protein_LOC106130686,_partial_[Amyelois_transitella]
3418	O_BomoN4EE13077_complete:A_BomoN4EE_TR30584_c1_g7_i1 304bp	Bomo_Chr14	enzymatic_polyprotein_endonuclease_reverse_[Lasius_niger]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3419	O_BomoN4EE13078_complete:A_BomoN4EE_TR30584_c1_g7_i1 163bp	Bomo_Chr14	RE36839p_[Drosophila_melanogaster]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3420	O_BomoN4EE13079_complete:A_BomoN4EE_TR30584_c1_g7_i1 146bp	Bomo_Chr14	Retrovirus-related_Pol_polyprotein_from_transposon_412-like_Protein_[Tribolium_castaneum]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis