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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3181 O_BomoN4EE12864_complete:A_BomoN4EE_TR30572_c0_g3_i3
161bp
3182 O_BomoN4EE12865_complete:A_BomoN4EE_TR30572_c0_g3_i3
144bp
3183 O_BomoN4EE12866_complete:A_BomoN4EE_TR30572_c0_g3_i3
139bp
3184 O_BomoN4EE12867_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i4
1231bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X13_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
3185 O_BomoN4EE12868_complete:A_BomoN4EE_TR30572_c0_g3_i4
139bp
3186 O_BomoN4EE12869_complete:A_BomoN4EE_TR30572_c0_g3_i4
133bp
3187 O_BomoN4EE1286_5prime_partial:A_BomoN4EE_TR17581_c0_g1_i1
147bp
3188 O_BomoN4EE12870_complete:A_BomoN4EE_TR30572_c0_g3_i4
128bp
3189 O_BomoN4EE12871_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i5
1227bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X14_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
3190 O_BomoN4EE12872_complete:A_BomoN4EE_TR30572_c0_g3_i5
156bp
3191 O_BomoN4EE12873_complete:A_BomoN4EE_TR30572_c0_g3_i5
139bp
3192 O_BomoN4EE12874_complete:A_BomoN4EE_TR30572_c0_g3_i5
133bp
3193 O_BomoN4EE12875_complete:A_BomoN4EE_TR30572_c0_g3_i5
128bp
3194 O_BomoN4EE12876_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i6
369bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X41_[Bombyx_mori]
3195 O_BomoN4EE12877_complete:A_BomoN4EE_TR30572_c0_g3_i6
128bp
3196 O_BomoN4EE12878_complete:A_BomoN4EE_TR30572_c0_g3_i6
117bp
3197 O_BomoN4EE12879_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i8
1223bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X41_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
3198 O_BomoN4EE1287_5prime_partial:A_BomoN4EE_TR17591_c0_g1_i1
101bp
3199 O_BomoN4EE12880_complete:A_BomoN4EE_TR30572_c0_g3_i8
139bp
3200 O_BomoN4EE12881_complete:A_BomoN4EE_TR30572_c0_g3_i8
128bp
3201 O_BomoN4EE12882_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i9
373bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X46_[Bombyx_mori]
3202 O_BomoN4EE12883_complete:A_BomoN4EE_TR30572_c0_g3_i9
128bp
3203 O_BomoN4EE12884_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i10
381bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X14_[Bombyx_mori]
3204 O_BomoN4EE12885_complete:A_BomoN4EE_TR30572_c0_g3_i10
133bp
3205 O_BomoN4EE12886_complete:A_BomoN4EE_TR30572_c0_g3_i10
128bp
3206 O_BomoN4EE12887_5prime_partial:A_BomoN4EE_TR30572_c0_g3_i11
377bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X10_[Bombyx_mori]
3207 O_BomoN4EE12888_complete:A_BomoN4EE_TR30572_c0_g3_i11
133bp
3208 O_BomoN4EE12889_complete:A_BomoN4EE_TR30572_c0_g3_i11
128bp
3209 O_BomoN4EE1288_3prime_partial:A_BomoN4EE_TR17592_c0_g1_i1
379bp
 PREDICTED:_structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0030915 C Smc5-Smc6 complex
GO:0033676 F double-stranded DNA helicase activity
GO:0051321 P meiotic cell cycle
3210 O_BomoN4EE12890_complete:A_BomoN4EE_TR30572_c0_g3_i11
117bp
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