SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/51699
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2881 O_BomoN4EE12594_complete:A_BomoN4EE_TR30121_c1_g1_i1
143bp
2882 O_BomoN4EE12595_complete:A_BomoN4EE_TR30121_c1_g1_i1
118bp
2883 O_BomoN4EE12596_complete:A_BomoN4EE_TR30121_c1_g1_i1
117bp
2884 O_BomoN4EE12597_complete:A_BomoN4EE_TR30121_c1_g1_i1
112bp
2885 O_BomoN4EE12598_complete:A_BomoN4EE_TR30121_c1_g1_i1
105bp
2886 O_BomoN4EE12599_complete:A_BomoN4EE_TR30121_c1_g1_i2
2921bp
 PREDICTED:_uncharacterized_protein_LOC101741882_isoform_X4_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
2887 O_BomoN4EE1259_complete:A_BomoN4EE_TR17422_c0_g1_i1
122bp
2888 O_BomoN4EE125_internal:A_BomoN4EE_TR2074_c0_g1_i1
161bp
 PREDICTED:_insulin-like_peptide_receptor_[Papilio_polytes]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005009 F insulin-activated receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008286 P insulin receptor signaling pathway
GO:0008340 P determination of adult lifespan
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017046 F peptide hormone binding
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0030424 C axon
GO:0030536 P larval feeding behavior
GO:0031410 C cytoplasmic vesicle
GO:0031513 C non-motile cilium
GO:0040018 P positive regulation of multicellular organism growth
GO:0040024 P dauer larval development
GO:0040034 P regulation of development, heterochronic
GO:0042169 F SH2 domain binding
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043025 C neuronal cell body
GO:0043053 P dauer entry
GO:0043054 P dauer exit
GO:0044214 C spanning component of plasma membrane
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0051425 F PTB domain binding
GO:0061065 P regulation of dauer larval development
GO:1901031 P regulation of response to reactive oxygen species
GO:1903998 P regulation of eating behavior
GO:2000785 P regulation of autophagosome assembly
2889 O_BomoN4EE12600_complete:A_BomoN4EE_TR30121_c1_g1_i2
348bp
2890 O_BomoN4EE12601_complete:A_BomoN4EE_TR30121_c1_g1_i2
264bp
2891 O_BomoN4EE12602_complete:A_BomoN4EE_TR30121_c1_g1_i2
151bp
2892 O_BomoN4EE12603_complete:A_BomoN4EE_TR30121_c1_g1_i2
143bp
2893 O_BomoN4EE12604_complete:A_BomoN4EE_TR30121_c1_g1_i2
118bp
2894 O_BomoN4EE12605_complete:A_BomoN4EE_TR30121_c1_g1_i2
112bp
2895 O_BomoN4EE12606_complete:A_BomoN4EE_TR30121_c1_g1_i2
105bp
2896 O_BomoN4EE12607_complete:A_BomoN4EE_TR30121_c1_g1_i3
1535bp
 PREDICTED:_supervillin-like_isoform_X1_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
2897 O_BomoN4EE12608_complete:A_BomoN4EE_TR30121_c1_g1_i3
348bp
2898 O_BomoN4EE12609_complete:A_BomoN4EE_TR30121_c1_g1_i3
264bp
2899 O_BomoN4EE1260_complete:A_BomoN4EE_TR17424_c0_g1_i1
1440bp
 PREDICTED:_putative_DNA_helicase_Ino80_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
2900 O_BomoN4EE12610_complete:A_BomoN4EE_TR30121_c1_g1_i3
151bp
2901 O_BomoN4EE12611_complete:A_BomoN4EE_TR30121_c1_g1_i3
118bp
2902 O_BomoN4EE12612_complete:A_BomoN4EE_TR30121_c1_g1_i3
114bp
2903 O_BomoN4EE12613_5prime_partial:A_BomoN4EE_TR30122_c0_g2_i4
136bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2904 O_BomoN4EE12614_5prime_partial:A_BomoN4EE_TR30122_c0_g2_i5
147bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2905 O_BomoN4EE12615_5prime_partial:A_BomoN4EE_TR30122_c0_g2_i6
102bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001755 P neural crest cell migration
GO:0001756 P somitogenesis
GO:0001843 P neural tube closure
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0019208 F phosphatase regulator activity
GO:0021540 P corpus callosum morphogenesis
GO:0021766 P hippocampus development
GO:0021846 P cell proliferation in forebrain
GO:0021957 P corticospinal tract morphogenesis
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0043507 P positive regulation of JUN kinase activity
GO:0045636 P positive regulation of melanocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048023 P positive regulation of melanin biosynthetic process
GO:0048066 P developmental pigmentation
GO:0048598 P embryonic morphogenesis
GO:0048668 P collateral sprouting
GO:0050772 P positive regulation of axonogenesis
GO:0061373 P mammillary axonal complex development
GO:0070412 F R-SMAD binding
GO:0097324 P melanocyte migration
GO:1902748 P positive regulation of lens fiber cell differentiation
GO:1903056 P regulation of melanosome organization
2906 O_BomoN4EE12616_complete:A_BomoN4EE_TR30122_c0_g3_i2
248bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
2907 O_BomoN4EE12617_complete:A_BomoN4EE_TR30122_c0_g3_i3
110bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
2908 O_BomoN4EE12618_3prime_partial:A_BomoN4EE_TR30122_c0_g3_i4
350bp
 PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
2909 O_BomoN4EE12619_5prime_partial:A_BomoN4EE_TR30122_c0_g3_i4
127bp
2910 O_BomoN4EE1261_complete:A_BomoN4EE_TR17424_c0_g1_i1
153bp
previous next from show/51699

- SilkBase 1999-2023 -