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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2821 O_BomoN4EE1253_internal:A_BomoN4EE_TR17309_c0_g1_i1
136bp
 PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
2822 O_BomoN4EE12540_complete:A_BomoN4EE_TR30115_c3_g1_i3
109bp
2823 O_BomoN4EE12541_complete:A_BomoN4EE_TR30115_c3_g1_i3
106bp
2824 O_BomoN4EE12542_complete:A_BomoN4EE_TR30115_c3_g1_i4
1128bp
 PREDICTED:_pre-rRNA-processing_protein_TSR1_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
GO:0072686 C mitotic spindle
2825 O_BomoN4EE12543_complete:A_BomoN4EE_TR30115_c3_g1_i4
1082bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007160 P cell-matrix adhesion
GO:0007165 P signal transduction
GO:0007269 P neurotransmitter secretion
GO:0014047 P glutamate secretion
GO:0048786 C presynaptic active zone
GO:0051497 P negative regulation of stress fiber assembly
GO:0090005 P negative regulation of protein localization to plasma membrane
2826 O_BomoN4EE12544_complete:A_BomoN4EE_TR30115_c3_g1_i4
423bp
2827 O_BomoN4EE12545_complete:A_BomoN4EE_TR30115_c3_g1_i4
283bp
2828 O_BomoN4EE12546_complete:A_BomoN4EE_TR30115_c3_g1_i4
182bp
2829 O_BomoN4EE12547_complete:A_BomoN4EE_TR30115_c3_g1_i4
132bp
2830 O_BomoN4EE12548_complete:A_BomoN4EE_TR30115_c3_g1_i4
109bp
2831 O_BomoN4EE12549_complete:A_BomoN4EE_TR30115_c3_g1_i4
106bp
2832 O_BomoN4EE1254_complete:A_BomoN4EE_TR17392_c0_g1_i1
169bp
 PREDICTED:_uncharacterized_protein_LOC106129404_[Amyelois_transitella]
2833 O_BomoN4EE12550_complete:A_BomoN4EE_TR30116_c0_g1_i3
325bp
 epidermal_retinal_dehydrogenase_[Bombyx_mori]
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
2834 O_BomoN4EE12551_complete:A_BomoN4EE_TR30116_c0_g1_i4
325bp
 epidermal_retinal_dehydrogenase_[Bombyx_mori]
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
2835 O_BomoN4EE12552_complete:A_BomoN4EE_TR30116_c0_g2_i1
325bp
 epidermal_retinal_dehydrogenase_[Bombyx_mori]
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
2836 O_BomoN4EE12553_5prime_partial:A_BomoN4EE_TR30117_c0_g1_i1
457bp
 PREDICTED:_uncharacterized_protein_LOC106123780_[Papilio_xuthus]
2837 O_BomoN4EE12554_complete:A_BomoN4EE_TR30117_c0_g1_i1
144bp
2838 O_BomoN4EE12555_complete:A_BomoN4EE_TR30117_c0_g1_i1
131bp
 KRAB-A_domain-containing_protein_2_[Melipona_quadrifasciata]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015074 P DNA integration
2839 O_BomoN4EE12556_5prime_partial:A_BomoN4EE_TR30118_c0_g2_i1
358bp
 putative_tetratricopeptide_repeat_protein_7B_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
2840 O_BomoN4EE12557_complete:A_BomoN4EE_TR30118_c0_g2_i1
180bp
2841 O_BomoN4EE12558_complete:A_BomoN4EE_TR30118_c0_g2_i1
154bp
2842 O_BomoN4EE12559_complete:A_BomoN4EE_TR30118_c0_g2_i2
229bp
 PREDICTED:_tetratricopeptide_repeat_protein_7B-like_[Amyelois_transitella]
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006879 P cellular iron ion homeostasis
GO:0016020 C membrane
GO:0030097 P hemopoiesis
GO:0090002 P protein localization to plasma membrane
2843 O_BomoN4EE1255_5prime_partial:A_BomoN4EE_TR17397_c0_g1_i1
101bp
2844 O_BomoN4EE12560_5prime_partial:A_BomoN4EE_TR30118_c0_g2_i2
174bp
2845 O_BomoN4EE12561_3prime_partial:A_BomoN4EE_TR30118_c0_g2_i2
150bp
 PREDICTED:_tetratricopeptide_repeat_protein_7B-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
2846 O_BomoN4EE12562_complete:A_BomoN4EE_TR30118_c0_g2_i2
143bp
2847 O_BomoN4EE12563_internal:A_BomoN4EE_TR30118_c0_g2_i3
404bp
 putative_tetratricopeptide_repeat_protein_7B_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
2848 O_BomoN4EE12564_5prime_partial:A_BomoN4EE_TR30118_c0_g2_i3
192bp
2849 O_BomoN4EE12565_complete:A_BomoN4EE_TR30118_c0_g2_i3
180bp
2850 O_BomoN4EE12566_complete:A_BomoN4EE_TR30118_c0_g2_i3
154bp
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