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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2461 O_BomoN4EE12215_3prime_partial:A_BomoN4EE_TR30074_c0_g2_i3
445bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
2462 O_BomoN4EE12216_complete:A_BomoN4EE_TR30074_c0_g2_i4
285bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
2463 O_BomoN4EE12217_complete:A_BomoN4EE_TR30074_c0_g2_i5
737bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
2464 O_BomoN4EE12218_complete:A_BomoN4EE_TR30074_c0_g2_i6
698bp
 PREDICTED:_uncharacterized_protein_LOC101738110_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
2465 O_BomoN4EE12219_internal:A_BomoN4EE_TR30076_c0_g1_i2
123bp
2466 O_BomoN4EE1221_complete:A_BomoN4EE_TR17070_c0_g1_i1
467bp
 PREDICTED:_probable_asparagine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004816 F asparagine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006421 P asparaginyl-tRNA aminoacylation
GO:0016874 F ligase activity
2467 O_BomoN4EE12220_complete:A_BomoN4EE_TR30076_c1_g2_i1
544bp
 PREDICTED:_protein_5NUC_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0008152 P metabolic process
GO:0008253 F 5'-nucleotidase activity
GO:0008254 F 3'-nucleotidase activity
GO:0008663 F 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
2468 O_BomoN4EE12221_complete:A_BomoN4EE_TR30076_c1_g2_i1
133bp
2469 O_BomoN4EE12222_3prime_partial:A_BomoN4EE_TR30076_c1_g2_i1
100bp
2470 O_BomoN4EE12223_complete:A_BomoN4EE_TR30077_c2_g1_i1
171bp
 ORF_A_span_522-1895;_first_start_codon_at_663_[Autographa_californica_nucleopolyhedrovirus]
2471 O_BomoN4EE12224_5prime_partial:A_BomoN4EE_TR30078_c2_g1_i1
115bp
 Pro-Pol_polyprotein_[Operophtera_brumata]
2472 O_BomoN4EE12225_5prime_partial:A_BomoN4EE_TR30078_c2_g2_i1
115bp
 Pro-Pol_polyprotein_[Operophtera_brumata]
2473 O_BomoN4EE12226_complete:A_BomoN4EE_TR30078_c3_g1_i3
279bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2474 O_BomoN4EE12227_complete:A_BomoN4EE_TR30078_c3_g1_i3
188bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
2475 O_BomoN4EE12228_complete:A_BomoN4EE_TR30078_c3_g1_i3
174bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
2476 O_BomoN4EE12229_complete:A_BomoN4EE_TR30078_c3_g1_i3
158bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2477 O_BomoN4EE1222_complete:A_BomoN4EE_TR17072_c0_g1_i1
632bp
 PREDICTED:_G-protein-signaling_modulator_2_isoform_X1_[Amyelois_transitella]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0001965 F G-protein alpha-subunit binding
GO:0005092 F GDP-dissociation inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0007052 P mitotic spindle organization
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0030695 F GTPase regulator activity
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0050790 P regulation of catalytic activity
GO:0051661 P maintenance of centrosome location
GO:0060487 P lung epithelial cell differentiation
GO:0097431 C mitotic spindle pole
2478 O_BomoN4EE12230_complete:A_BomoN4EE_TR30078_c3_g1_i3
108bp
2479 O_BomoN4EE12231_complete:A_BomoN4EE_TR30078_c3_g1_i4
279bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2480 O_BomoN4EE12232_complete:A_BomoN4EE_TR30078_c3_g1_i4
188bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
2481 O_BomoN4EE12233_complete:A_BomoN4EE_TR30078_c3_g1_i4
174bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
2482 O_BomoN4EE12234_complete:A_BomoN4EE_TR30078_c3_g1_i4
158bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2483 O_BomoN4EE12235_complete:A_BomoN4EE_TR30078_c3_g1_i4
108bp
2484 O_BomoN4EE12236_complete:A_BomoN4EE_TR30078_c4_g1_i1
900bp
 aubergine_protein_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0001556 P oocyte maturation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0006342 P heterochromatin assembly
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0007076 P mitotic chromosome condensation
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0010529 P negative regulation of transposition
GO:0016246 P RNA interference
GO:0030154 P cell differentiation
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0030717 P oocyte karyosome formation
GO:0031047 P gene silencing by RNA
GO:0034584 F piRNA binding
GO:0035282 P segmentation
GO:0043186 C P granule
GO:0045089 P positive regulation of innate immune response
GO:0046011 P regulation of oskar mRNA translation
GO:0046012 P positive regulation of oskar mRNA translation
GO:0046594 P maintenance of pole plasm mRNA location
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2485 O_BomoN4EE12237_complete:A_BomoN4EE_TR30078_c4_g1_i1
128bp
2486 O_BomoN4EE12238_complete:A_BomoN4EE_TR30078_c4_g1_i1
103bp
2487 O_BomoN4EE12239_complete:A_BomoN4EE_TR30079_c2_g1_i1
667bp
 PREDICTED:_gamma-tubulin_complex_component_4_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0000930 C gamma-tubulin complex
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006461 P protein-containing complex assembly
GO:0007020 P microtubule nucleation
GO:0007126 P meiotic cell cycle
GO:0008274 C gamma-tubulin large complex
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0044732 C mitotic spindle pole body
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0055037 C recycling endosome
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
2488 O_BomoN4EE1223_complete:A_BomoN4EE_TR17072_c0_g1_i1
177bp
2489 O_BomoN4EE12240_complete:A_BomoN4EE_TR30079_c2_g1_i2
281bp
 PREDICTED:_gamma-tubulin_complex_component_4_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0000930 C gamma-tubulin complex
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006461 P protein-containing complex assembly
GO:0007020 P microtubule nucleation
GO:0007126 P meiotic cell cycle
GO:0008274 C gamma-tubulin large complex
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0044732 C mitotic spindle pole body
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0055037 C recycling endosome
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
2490 O_BomoN4EE12241_complete:A_BomoN4EE_TR30079_c2_g1_i2
121bp
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