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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_BomoN4EE11892_complete:A_BomoN4EE_TR30055_c0_g2_i1
397bp
 PREDICTED:_zinc_finger_protein_260_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2102 O_BomoN4EE11893_complete:A_BomoN4EE_TR30055_c0_g2_i1
146bp
2103 O_BomoN4EE11894_complete:A_BomoN4EE_TR30055_c0_g2_i1
127bp
2104 O_BomoN4EE11895_complete:A_BomoN4EE_TR30057_c0_g1_i2
380bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
2105 O_BomoN4EE11896_complete:A_BomoN4EE_TR30057_c0_g1_i3
142bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
2106 O_BomoN4EE11897_complete:A_BomoN4EE_TR30057_c0_g1_i4
153bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
2107 O_BomoN4EE11898_complete:A_BomoN4EE_TR30057_c0_g1_i5
380bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
2108 O_BomoN4EE11899_complete:A_BomoN4EE_TR30057_c0_g1_i5
142bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
2109 O_BomoN4EE1189_complete:A_BomoN4EE_TR16355_c0_g1_i1
955bp
 PREDICTED:_protein_FAM214A_[Bombyx_mori]
2110 O_BomoN4EE118_internal:A_BomoN4EE_TR1897_c0_g1_i1
110bp
 PREDICTED:_PCTP-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005902 C microvillus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0032782 P bile acid secretion
GO:0035360 P positive regulation of peroxisome proliferator activated receptor signaling pathway
GO:0042995 C cell projection
GO:0046581 C intercellular canaliculus
2111 O_BomoN4EE11900_complete:A_BomoN4EE_TR30057_c0_g1_i6
506bp
 PREDICTED:_zinc_finger_protein_221-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
2112 O_BomoN4EE11901_complete:A_BomoN4EE_TR30058_c0_g1_i1
991bp
 PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0032880 P regulation of protein localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
2113 O_BomoN4EE11902_complete:A_BomoN4EE_TR30058_c0_g1_i1
186bp
2114 O_BomoN4EE11903_complete:A_BomoN4EE_TR30058_c0_g1_i2
1301bp
 PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0032880 P regulation of protein localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
2115 O_BomoN4EE11904_complete:A_BomoN4EE_TR30058_c0_g1_i2
186bp
2116 O_BomoN4EE11905_complete:A_BomoN4EE_TR30058_c0_g1_i3
1330bp
 PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0032880 P regulation of protein localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
2117 O_BomoN4EE11906_complete:A_BomoN4EE_TR30058_c0_g1_i3
186bp
2118 O_BomoN4EE11907_complete:A_BomoN4EE_TR30058_c0_g1_i4
1330bp
 PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0032880 P regulation of protein localization
GO:0061024 P membrane organization
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
2119 O_BomoN4EE11908_complete:A_BomoN4EE_TR30058_c0_g1_i4
186bp
2120 O_BomoN4EE11909_internal:A_BomoN4EE_TR30058_c1_g1_i1
104bp
 PREDICTED:_uncharacterized_protein_LOC101741500_[Bombyx_mori]
2121 O_BomoN4EE1190_complete:A_BomoN4EE_TR16355_c0_g1_i1
146bp
 PREDICTED:_protein_FAM214A_[Bombyx_mori]
2122 O_BomoN4EE11910_internal:A_BomoN4EE_TR30059_c0_g1_i1
234bp
 hypothetical_protein_KGM_02867_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2123 O_BomoN4EE11911_3prime_partial:A_BomoN4EE_TR30059_c0_g1_i1
125bp
2124 O_BomoN4EE11912_complete:A_BomoN4EE_TR30059_c0_g1_i2
334bp
 PREDICTED:_DNA_polymerase_subunit_gamma-1,_mitochondrial_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2125 O_BomoN4EE11913_internal:A_BomoN4EE_TR30059_c0_g1_i3
862bp
 DNA_polymerase_subunit_gamma-1,_mitochondrial_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2126 O_BomoN4EE11914_complete:A_BomoN4EE_TR30059_c0_g1_i3
346bp
2127 O_BomoN4EE11915_complete:A_BomoN4EE_TR30059_c0_g1_i3
156bp
2128 O_BomoN4EE11916_3prime_partial:A_BomoN4EE_TR30059_c0_g1_i4
1082bp
 DNA_polymerase_subunit_gamma-1,_mitochondrial_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2129 O_BomoN4EE11917_complete:A_BomoN4EE_TR30059_c0_g1_i4
346bp
2130 O_BomoN4EE11918_complete:A_BomoN4EE_TR30059_c0_g1_i4
156bp
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