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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1921 O_BomoN4EE1172_complete:A_BomoN4EE_TR16311_c0_g1_i1
516bp
 PREDICTED:_ATP-dependent_RNA_helicase_p62-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0006417 P regulation of translation
GO:0010501 P RNA secondary structure unwinding
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0031047 P gene silencing by RNA
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050688 P regulation of defense response to virus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1922 O_BomoN4EE11730_3prime_partial:A_BomoN4EE_TR30032_c0_g1_i1
319bp
 PREDICTED:_lipase_1-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0007586 P digestion
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
1923 O_BomoN4EE11731_5prime_partial:A_BomoN4EE_TR30032_c1_g1_i1
105bp
 PREDICTED:_lipase_3-like_[Bombyx_mori]
GO:0004806 F triglyceride lipase activity
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
1924 O_BomoN4EE11732_internal:A_BomoN4EE_TR30032_c2_g1_i1
116bp
 PREDICTED:_lipase_3-like_[Bombyx_mori]
1925 O_BomoN4EE11733_complete:A_BomoN4EE_TR30033_c0_g1_i1
939bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_2-like_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
1926 O_BomoN4EE11734_complete:A_BomoN4EE_TR30033_c0_g1_i1
100bp
1927 O_BomoN4EE11735_complete:A_BomoN4EE_TR30034_c0_g1_i1
664bp
 PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
1928 O_BomoN4EE11736_complete:A_BomoN4EE_TR30034_c0_g1_i1
102bp
 PREDICTED:_protein_D7-like_[Amyelois_transitella]
GO:0046872 F metal ion binding
1929 O_BomoN4EE11737_complete:A_BomoN4EE_TR30034_c0_g1_i2
579bp
 PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
1930 O_BomoN4EE11738_complete:A_BomoN4EE_TR30034_c0_g1_i2
102bp
 PREDICTED:_protein_D7-like_[Amyelois_transitella]
GO:0046872 F metal ion binding
1931 O_BomoN4EE11739_5prime_partial:A_BomoN4EE_TR30035_c0_g1_i1
105bp
1932 O_BomoN4EE1173_internal:A_BomoN4EE_TR16312_c0_g1_i1
141bp
 PREDICTED:_potassium_voltage-gated_channel_protein_eag_[Papilio_polytes]
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007608 P sensory perception of smell
GO:0007611 P learning or memory
GO:0007612 P learning
GO:0007619 P courtship behavior
GO:0007629 P flight behavior
GO:0008016 P regulation of heart contraction
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022843 F voltage-gated cation channel activity
GO:0023014 P signal transduction
GO:0030154 P cell differentiation
GO:0034765 P regulation of ion transmembrane transport
GO:0042066 P perineurial glial growth
GO:0042391 P regulation of membrane potential
GO:0048150 P behavioral response to ether
GO:0051259 P protein complex oligomerization
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
1933 O_BomoN4EE11740_3prime_partial:A_BomoN4EE_TR30035_c1_g1_i1
351bp
 PREDICTED:_uncharacterized_protein_LOC103522594,_partial_[Diaphorina_citri]
1934 O_BomoN4EE11741_5prime_partial:A_BomoN4EE_TR30035_c2_g1_i1
833bp
 Retrovirus-related_Pol_polyprotein_from_type-2_retrotransposable_element_R2DM_[Exaiptasia_pallida]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1935 O_BomoN4EE11742_complete:A_BomoN4EE_TR30035_c2_g1_i1
125bp
1936 O_BomoN4EE11743_internal:A_BomoN4EE_TR30036_c0_g1_i1
161bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1937 O_BomoN4EE11744_3prime_partial:A_BomoN4EE_TR30036_c1_g1_i1
222bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
1938 O_BomoN4EE11745_complete:A_BomoN4EE_TR30036_c1_g1_i1
118bp
1939 O_BomoN4EE11746_3prime_partial:A_BomoN4EE_TR30036_c1_g1_i2
145bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
1940 O_BomoN4EE11747_5prime_partial:A_BomoN4EE_TR30037_c1_g1_i1
157bp
1941 O_BomoN4EE11748_5prime_partial:A_BomoN4EE_TR30037_c1_g1_i1
153bp
1942 O_BomoN4EE11749_5prime_partial:A_BomoN4EE_TR30037_c1_g1_i1
136bp
1943 O_BomoN4EE1174_5prime_partial:A_BomoN4EE_TR16320_c0_g1_i1
104bp
1944 O_BomoN4EE11750_5prime_partial:A_BomoN4EE_TR30037_c1_g2_i1
157bp
1945 O_BomoN4EE11751_5prime_partial:A_BomoN4EE_TR30037_c1_g2_i1
153bp
1946 O_BomoN4EE11752_5prime_partial:A_BomoN4EE_TR30037_c1_g2_i1
136bp
1947 O_BomoN4EE11753_complete:A_BomoN4EE_TR30037_c2_g1_i1
204bp
1948 O_BomoN4EE11754_complete:A_BomoN4EE_TR30037_c2_g1_i1
125bp
 triose-phosphate_transporter-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034219 P carbohydrate transmembrane transport
1949 O_BomoN4EE11755_complete:A_BomoN4EE_TR30037_c2_g1_i1
112bp
 triose-phosphate_transporter-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034219 P carbohydrate transmembrane transport
1950 O_BomoN4EE11756_complete:A_BomoN4EE_TR30037_c2_g1_i2
312bp
 triose-phosphate_transporter-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034219 P carbohydrate transmembrane transport
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