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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1771 O_BomoN4EE11595_complete:A_BomoN4EE_TR29546_c0_g1_i2
132bp
1772 O_BomoN4EE11596_complete:A_BomoN4EE_TR29547_c0_g1_i1
126bp
 PREDICTED:_uncharacterized_protein_LOC101745299_isoform_X2_[Bombyx_mori]
1773 O_BomoN4EE11597_complete:A_BomoN4EE_TR29547_c0_g1_i2
238bp
 PREDICTED:_uncharacterized_protein_LOC101745299_isoform_X1_[Bombyx_mori]
1774 O_BomoN4EE11598_complete:A_BomoN4EE_TR29548_c0_g1_i1
396bp
 PREDICTED:_visual_system_homeobox_2-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0043010 P camera-type eye development
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060040 P retinal bipolar neuron differentiation
GO:0060042 P retina morphogenesis in camera-type eye
1775 O_BomoN4EE11599_complete:A_BomoN4EE_TR29548_c0_g1_i2
267bp
 PREDICTED:_visual_system_homeobox_2-like_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007601 P visual perception
GO:0021501 P prechordal plate formation
GO:0030900 P forebrain development
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048318 P axial mesoderm development
GO:0048329 P negative regulation of axial mesodermal cell fate specification
GO:0048339 P paraxial mesoderm development
GO:0048348 P paraxial mesodermal cell fate specification
GO:0048666 P neuron development
GO:0050896 P response to stimulus
1776 O_BomoN4EE1159_complete:A_BomoN4EE_TR16256_c0_g1_i1
287bp
 PREDICTED:_uncharacterized_protein_LOC105842299_isoform_X1_[Bombyx_mori]
1777 O_BomoN4EE115_internal:A_BomoN4EE_TR1835_c0_g1_i1
110bp
 glutathione_S-transferase_sigma_1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
1778 O_BomoN4EE11600_complete:A_BomoN4EE_TR29548_c0_g1_i2
139bp
 PREDICTED:_visual_system_homeobox_2-like_isoform_X1_[Bombyx_mori]
1779 O_BomoN4EE11601_5prime_partial:A_BomoN4EE_TR29550_c0_g1_i1
122bp
 PREDICTED:_cyclin-dependent_kinase_20-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0042995 C cell projection
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0060271 P cilium assembly
1780 O_BomoN4EE11602_5prime_partial:A_BomoN4EE_TR29550_c0_g1_i2
122bp
 PREDICTED:_cyclin-dependent_kinase_20-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0042995 C cell projection
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0060271 P cilium assembly
1781 O_BomoN4EE11603_complete:A_BomoN4EE_TR29551_c0_g2_i1
230bp
 PREDICTED:_lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
1782 O_BomoN4EE11604_complete:A_BomoN4EE_TR29552_c0_g1_i1
197bp
 PREDICTED:_histone_deacetylase_11_[Papilio_xuthus]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070062 C extracellular exosome
GO:0070932 P histone H3 deacetylation
1783 O_BomoN4EE11605_complete:A_BomoN4EE_TR29552_c0_g1_i2
331bp
 PREDICTED:_histone_deacetylase_11_[Papilio_xuthus]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070062 C extracellular exosome
GO:0070932 P histone H3 deacetylation
1784 O_BomoN4EE11606_complete:A_BomoN4EE_TR29552_c0_g1_i2
111bp
1785 O_BomoN4EE11607_complete:A_BomoN4EE_TR29553_c0_g1_i1
736bp
 PREDICTED:_kinesin-like_protein_a_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0000775 C chromosome, centromeric region
GO:0000922 C spindle pole
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007019 P microtubule depolymerization
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007057 P spindle assembly involved in female meiosis I
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0051296 P establishment of meiotic spindle orientation
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0055028 C cortical microtubule
GO:0061673 C mitotic spindle astral microtubule
GO:0072687 C meiotic spindle
GO:0090307 P mitotic spindle assembly
GO:0090619 C meiotic spindle pole
GO:0097431 C mitotic spindle pole
1786 O_BomoN4EE11608_complete:A_BomoN4EE_TR29553_c0_g1_i1
256bp
1787 O_BomoN4EE11609_complete:A_BomoN4EE_TR29553_c0_g1_i1
234bp
1788 O_BomoN4EE1160_3prime_partial:A_BomoN4EE_TR16262_c0_g3_i2
106bp
1789 O_BomoN4EE11610_complete:A_BomoN4EE_TR29553_c0_g1_i1
133bp
1790 O_BomoN4EE11611_complete:A_BomoN4EE_TR29553_c0_g1_i1
120bp
1791 O_BomoN4EE11612_complete:A_BomoN4EE_TR29553_c0_g1_i1
109bp
1792 O_BomoN4EE11613_complete:A_BomoN4EE_TR29553_c0_g1_i1
105bp
1793 O_BomoN4EE11614_complete:A_BomoN4EE_TR29553_c0_g1_i1
105bp
1794 O_BomoN4EE11615_complete:A_BomoN4EE_TR29553_c0_g1_i1
101bp
1795 O_BomoN4EE11616_complete:A_BomoN4EE_TR29553_c0_g1_i2
736bp
 PREDICTED:_kinesin-like_protein_a_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0000775 C chromosome, centromeric region
GO:0000922 C spindle pole
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007019 P microtubule depolymerization
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007057 P spindle assembly involved in female meiosis I
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0051296 P establishment of meiotic spindle orientation
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0055028 C cortical microtubule
GO:0061673 C mitotic spindle astral microtubule
GO:0072687 C meiotic spindle
GO:0090307 P mitotic spindle assembly
GO:0090619 C meiotic spindle pole
GO:0097431 C mitotic spindle pole
1796 O_BomoN4EE11617_complete:A_BomoN4EE_TR29553_c0_g1_i2
256bp
1797 O_BomoN4EE11618_complete:A_BomoN4EE_TR29553_c0_g1_i2
234bp
1798 O_BomoN4EE11619_complete:A_BomoN4EE_TR29553_c0_g1_i2
133bp
1799 O_BomoN4EE1161_3prime_partial:A_BomoN4EE_TR16268_c0_g1_i1
153bp
 Tektin_[Operophtera_brumata]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0042995 C cell projection
1800 O_BomoN4EE11620_complete:A_BomoN4EE_TR29553_c0_g1_i2
120bp
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