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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1621 O_BomoN4EE1145_complete:A_BomoN4EE_TR16181_c0_g1_i1
602bp
 PREDICTED:_serine/threonine-protein_kinase_RIO3_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006468 P protein phosphorylation
GO:0007059 P chromosome segregation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
1622 O_BomoN4EE11460_complete:A_BomoN4EE_TR29507_c0_g1_i5
797bp
 PREDICTED:_uncharacterized_protein_LOC106131368_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1623 O_BomoN4EE11461_complete:A_BomoN4EE_TR29510_c0_g1_i1
885bp
 Vacuolar_protein_sorting,_partial_[Operophtera_brumata]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
1624 O_BomoN4EE11462_internal:A_BomoN4EE_TR29511_c0_g1_i1
234bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
1625 O_BomoN4EE11463_internal:A_BomoN4EE_TR29511_c0_g1_i1
234bp
 conserved_hypothetical_protein_[Culex_quinquefasciatus]
1626 O_BomoN4EE11464_5prime_partial:A_BomoN4EE_TR29512_c1_g1_i1
110bp
 PREDICTED:_cleft_lip_and_palate_transmembrane_protein_1_homolog_[Bombyx_mori]
1627 O_BomoN4EE11465_5prime_partial:A_BomoN4EE_TR29513_c0_g1_i1
228bp
 hypothetical_protein_KGM_05577_[Danaus_plexippus]
1628 O_BomoN4EE11466_5prime_partial:A_BomoN4EE_TR29513_c0_g1_i1
175bp
 PREDICTED:_uncharacterized_protein_LOC101745112_[Bombyx_mori]
1629 O_BomoN4EE11467_3prime_partial:A_BomoN4EE_TR29513_c0_g1_i1
133bp
1630 O_BomoN4EE11468_5prime_partial:A_BomoN4EE_TR29513_c0_g2_i1
984bp
 PREDICTED:_uncharacterized_protein_LOC101745112_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0016020 C membrane
1631 O_BomoN4EE11469_3prime_partial:A_BomoN4EE_TR29513_c0_g2_i1
142bp
1632 O_BomoN4EE1146_complete:A_BomoN4EE_TR16181_c0_g1_i1
160bp
1633 O_BomoN4EE11470_complete:A_BomoN4EE_TR29513_c0_g2_i1
142bp
1634 O_BomoN4EE11471_complete:A_BomoN4EE_TR29513_c0_g2_i1
105bp
1635 O_BomoN4EE11472_5prime_partial:A_BomoN4EE_TR29513_c0_g2_i1
103bp
1636 O_BomoN4EE11473_complete:A_BomoN4EE_TR29514_c0_g1_i1
290bp
 PREDICTED:_protein_abrupt-like_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
1637 O_BomoN4EE11474_complete:A_BomoN4EE_TR29514_c0_g1_i1
120bp
 PREDICTED:_kelch-like_protein_12_isoform_X2_[Papilio_machaon]
1638 O_BomoN4EE11475_complete:A_BomoN4EE_TR29514_c0_g1_i2
418bp
 PREDICTED:_protein_abrupt-like_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
1639 O_BomoN4EE11476_complete:A_BomoN4EE_TR29514_c0_g1_i3
418bp
 PREDICTED:_protein_abrupt-like_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
1640 O_BomoN4EE11477_complete:A_BomoN4EE_TR29514_c0_g1_i4
290bp
 PREDICTED:_protein_abrupt-like_isoform_X2_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
1641 O_BomoN4EE11478_complete:A_BomoN4EE_TR29514_c0_g1_i4
120bp
 PREDICTED:_kelch-like_protein_12_isoform_X2_[Papilio_machaon]
1642 O_BomoN4EE11479_3prime_partial:A_BomoN4EE_TR29515_c0_g1_i1
265bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
1643 O_BomoN4EE1147_5prime_partial:A_BomoN4EE_TR16203_c0_g1_i1
114bp
1644 O_BomoN4EE11480_complete:A_BomoN4EE_TR29515_c0_g1_i1
125bp
1645 O_BomoN4EE11481_complete:A_BomoN4EE_TR29515_c0_g2_i1
641bp
 PREDICTED:_protein_IWS1_homolog_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0090239 P regulation of histone H4 acetylation
GO:2001253 P regulation of histone H3-K36 trimethylation
1646 O_BomoN4EE11482_complete:A_BomoN4EE_TR29515_c0_g2_i1
466bp
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1647 O_BomoN4EE11483_complete:A_BomoN4EE_TR29515_c0_g2_i1
368bp
1648 O_BomoN4EE11484_complete:A_BomoN4EE_TR29515_c0_g2_i1
191bp
1649 O_BomoN4EE11485_complete:A_BomoN4EE_TR29515_c0_g2_i1
125bp
1650 O_BomoN4EE11486_5prime_partial:A_BomoN4EE_TR29515_c0_g2_i2
455bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0090239 P regulation of histone H4 acetylation
GO:2001253 P regulation of histone H3-K36 trimethylation
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