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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1021 O_BomoN4EE1091_complete:A_BomoN4EE_TR14951_c1_g1_i1
137bp
1022 O_BomoN4EE10920_5prime_partial:A_BomoN4EE_TR29215_c0_g3_i1
430bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM135A_[Bombyx_mori]
1023 O_BomoN4EE10921_complete:A_BomoN4EE_TR29218_c0_g1_i1
260bp
 PREDICTED:_TGF_beta-inducible_nuclear_protein_1_isoform_X1_[Bombyx_mori]
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
1024 O_BomoN4EE10922_complete:A_BomoN4EE_TR29218_c0_g2_i1
260bp
 PREDICTED:_TGF_beta-inducible_nuclear_protein_1_isoform_X1_[Bombyx_mori]
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
1025 O_BomoN4EE10923_complete:A_BomoN4EE_TR29222_c0_g1_i1
163bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1026 O_BomoN4EE10924_complete:A_BomoN4EE_TR29222_c0_g2_i1
117bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1027 O_BomoN4EE10925_complete:A_BomoN4EE_TR29226_c0_g1_i1
305bp
 THAP_domain-containing_protein_9,_partial_[Camponotus_floridanus]
1028 O_BomoN4EE10926_complete:A_BomoN4EE_TR29226_c0_g1_i2
416bp
 PREDICTED:_uncharacterized_protein_LOC106689666_[Halyomorpha_halys]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1029 O_BomoN4EE10927_complete:A_BomoN4EE_TR29228_c0_g1_i1
600bp
 PREDICTED:_A-kinase_anchor_protein_1,_mitochondrial_isoform_X2_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005811 C lipid droplet
GO:0008017 F microtubule binding
GO:0010614 P negative regulation of cardiac muscle hypertrophy
GO:0010738 P regulation of protein kinase A signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030061 C mitochondrial crista
GO:0030346 F protein phosphatase 2B binding
GO:0031594 C neuromuscular junction
GO:0032947 F molecular adaptor activity
GO:0034237 F protein kinase A regulatory subunit binding
GO:0035308 P negative regulation of protein dephosphorylation
GO:0045211 C postsynaptic membrane
GO:0048487 F beta-tubulin binding
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0071320 P cellular response to cAMP
GO:0071375 P cellular response to peptide hormone stimulus
1030 O_BomoN4EE10928_complete:A_BomoN4EE_TR29228_c0_g1_i1
107bp
1031 O_BomoN4EE10929_complete:A_BomoN4EE_TR29228_c0_g1_i2
602bp
 PREDICTED:_A-kinase_anchor_protein_1,_mitochondrial_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005783 C endoplasmic reticulum
GO:0005811 C lipid droplet
GO:0008017 F microtubule binding
GO:0010614 P negative regulation of cardiac muscle hypertrophy
GO:0010738 P regulation of protein kinase A signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030061 C mitochondrial crista
GO:0030346 F protein phosphatase 2B binding
GO:0031594 C neuromuscular junction
GO:0032947 F molecular adaptor activity
GO:0034237 F protein kinase A regulatory subunit binding
GO:0035308 P negative regulation of protein dephosphorylation
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0048487 F beta-tubulin binding
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0071320 P cellular response to cAMP
GO:0071375 P cellular response to peptide hormone stimulus
1032 O_BomoN4EE1092_internal:A_BomoN4EE_TR14952_c0_g1_i1
162bp
 PREDICTED:_uncharacterized_protein_LOC101744370_[Bombyx_mori]
1033 O_BomoN4EE10930_complete:A_BomoN4EE_TR29228_c0_g1_i2
107bp
1034 O_BomoN4EE10931_complete:A_BomoN4EE_TR29228_c0_g1_i3
602bp
 PREDICTED:_A-kinase_anchor_protein_1,_mitochondrial_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005783 C endoplasmic reticulum
GO:0005811 C lipid droplet
GO:0008017 F microtubule binding
GO:0010614 P negative regulation of cardiac muscle hypertrophy
GO:0010738 P regulation of protein kinase A signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0030061 C mitochondrial crista
GO:0030346 F protein phosphatase 2B binding
GO:0031594 C neuromuscular junction
GO:0032947 F molecular adaptor activity
GO:0034237 F protein kinase A regulatory subunit binding
GO:0035308 P negative regulation of protein dephosphorylation
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0048487 F beta-tubulin binding
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0071320 P cellular response to cAMP
GO:0071375 P cellular response to peptide hormone stimulus
1035 O_BomoN4EE10932_complete:A_BomoN4EE_TR29228_c0_g1_i3
107bp
1036 O_BomoN4EE10933_5prime_partial:A_BomoN4EE_TR29230_c0_g1_i1
1932bp
 PREDICTED:_uncharacterized_protein_LOC101741769_[Bombyx_mori]
GO:0001965 F G-protein alpha-subunit binding
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0038032 P termination of G protein-coupled receptor signaling pathway
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045744 P negative regulation of G protein-coupled receptor signaling pathway
GO:0050790 P regulation of catalytic activity
GO:0097440 C apical dendrite
1037 O_BomoN4EE10934_complete:A_BomoN4EE_TR29230_c0_g1_i1
112bp
1038 O_BomoN4EE10935_complete:A_BomoN4EE_TR29230_c0_g1_i1
103bp
1039 O_BomoN4EE10936_complete:A_BomoN4EE_TR29231_c0_g1_i1
265bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1040 O_BomoN4EE10937_complete:A_BomoN4EE_TR29231_c0_g1_i2
177bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1041 O_BomoN4EE10938_complete:A_BomoN4EE_TR29231_c0_g1_i2
130bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1042 O_BomoN4EE10939_complete:A_BomoN4EE_TR29231_c0_g1_i3
130bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1043 O_BomoN4EE1093_5prime_partial:A_BomoN4EE_TR14981_c0_g1_i1
107bp
1044 O_BomoN4EE10940_complete:A_BomoN4EE_TR29231_c0_g1_i3
130bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1045 O_BomoN4EE10941_complete:A_BomoN4EE_TR29231_c0_g1_i4
312bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1046 O_BomoN4EE10942_complete:A_BomoN4EE_TR29231_c0_g1_i5
265bp
 PREDICTED:_uncharacterized_protein_LOC101745966_isoform_X2_[Bombyx_mori]
1047 O_BomoN4EE10943_complete:A_BomoN4EE_TR29232_c1_g1_i1
539bp
 matrix_metalloproteinase_1_isoform_2_[Bombyx_mori]
GO:0001503 P ossification
GO:0001525 P angiogenesis
GO:0001541 P ovarian follicle development
GO:0001666 P response to hypoxia
GO:0001935 P endothelial cell proliferation
GO:0001958 P endochondral ossification
GO:0004222 F metalloendopeptidase activity
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008584 P male gonad development
GO:0009612 P response to mechanical stimulus
GO:0009725 P response to hormone
GO:0010831 P positive regulation of myotube differentiation
GO:0010952 P positive regulation of peptidase activity
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
GO:0030307 P positive regulation of cell growth
GO:0030324 P lung development
GO:0030335 P positive regulation of cell migration
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0031410 C cytoplasmic vesicle
GO:0031638 P zymogen activation
GO:0035987 P endodermal cell differentiation
GO:0035988 P chondrocyte proliferation
GO:0042470 C melanosome
GO:0043615 P astrocyte cell migration
GO:0043627 P response to estrogen
GO:0044354 C macropinosome
GO:0045579 P positive regulation of B cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0048771 P tissue remodeling
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060348 P bone development
GO:0097094 P craniofacial suture morphogenesis
1048 O_BomoN4EE10944_complete:A_BomoN4EE_TR29232_c1_g1_i2
562bp
 matrix_metalloproteinase_1_isoform_1_[Bombyx_mori]
GO:0001503 P ossification
GO:0001525 P angiogenesis
GO:0001541 P ovarian follicle development
GO:0001666 P response to hypoxia
GO:0001935 P endothelial cell proliferation
GO:0001958 P endochondral ossification
GO:0004222 F metalloendopeptidase activity
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008584 P male gonad development
GO:0009612 P response to mechanical stimulus
GO:0009725 P response to hormone
GO:0010831 P positive regulation of myotube differentiation
GO:0010952 P positive regulation of peptidase activity
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
GO:0030307 P positive regulation of cell growth
GO:0030324 P lung development
GO:0030335 P positive regulation of cell migration
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0031410 C cytoplasmic vesicle
GO:0031638 P zymogen activation
GO:0035987 P endodermal cell differentiation
GO:0035988 P chondrocyte proliferation
GO:0042470 C melanosome
GO:0043615 P astrocyte cell migration
GO:0043627 P response to estrogen
GO:0044354 C macropinosome
GO:0045579 P positive regulation of B cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0048771 P tissue remodeling
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060348 P bone development
GO:0097094 P craniofacial suture morphogenesis
1049 O_BomoN4EE10945_complete:A_BomoN4EE_TR29232_c1_g1_i4
539bp
 matrix_metalloproteinase_1_isoform_2_[Bombyx_mori]
GO:0001503 P ossification
GO:0001525 P angiogenesis
GO:0001541 P ovarian follicle development
GO:0001666 P response to hypoxia
GO:0001935 P endothelial cell proliferation
GO:0001958 P endochondral ossification
GO:0004222 F metalloendopeptidase activity
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008584 P male gonad development
GO:0009612 P response to mechanical stimulus
GO:0009725 P response to hormone
GO:0010831 P positive regulation of myotube differentiation
GO:0010952 P positive regulation of peptidase activity
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
GO:0030307 P positive regulation of cell growth
GO:0030324 P lung development
GO:0030335 P positive regulation of cell migration
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0031410 C cytoplasmic vesicle
GO:0031638 P zymogen activation
GO:0035987 P endodermal cell differentiation
GO:0035988 P chondrocyte proliferation
GO:0042470 C melanosome
GO:0043615 P astrocyte cell migration
GO:0043627 P response to estrogen
GO:0044354 C macropinosome
GO:0045579 P positive regulation of B cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0048771 P tissue remodeling
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060348 P bone development
GO:0097094 P craniofacial suture morphogenesis
1050 O_BomoN4EE10946_complete:A_BomoN4EE_TR29235_c0_g1_i1
489bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
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