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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9331 O_BomoMG26324_5prime_partial:A_BomoMG_comp41155_c0_seq26
1140bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9332 O_BomoMG26325_complete:A_BomoMG_comp41155_c0_seq26
339bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9333 O_BomoMG26349_5prime_partial:A_BomoMG_comp41157_c1_seq3
144bp
9334 O_BomoMG26351_complete:A_BomoMG_comp41157_c1_seq7
146bp
9335 O_BomoMG26352_5prime_partial:A_BomoMG_comp41157_c1_seq9
144bp
9336 O_BomoMG26355_complete:A_BomoMG_comp41158_c1_seq3
306bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9337 O_BomoMG26357_complete:A_BomoMG_comp41158_c1_seq4
306bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9338 O_BomoMG26358_5prime_partial:A_BomoMG_comp41158_c1_seq4
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9339 O_BomoMG26360_complete:A_BomoMG_comp41158_c1_seq5
306bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9340 O_BomoMG26361_5prime_partial:A_BomoMG_comp41158_c1_seq5
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9341 O_BomoMG26363_5prime_partial:A_BomoMG_comp41158_c1_seq6
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9342 O_BomoMG26367_5prime_partial:A_BomoMG_comp41158_c1_seq9
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9343 O_BomoMG26369_complete:A_BomoMG_comp41158_c1_seq10
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9344 O_BomoMG2636_complete:A_BomoMG_comp22098_c0_seq1
109bp
 cytochrome_c_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0009055 F electron transfer activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
9345 O_BomoMG26371_complete:A_BomoMG_comp41158_c1_seq11
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9346 O_BomoMG26373_5prime_partial:A_BomoMG_comp41158_c1_seq12
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9347 O_BomoMG26376_5prime_partial:A_BomoMG_comp41158_c1_seq14
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9348 O_BomoMG26378_5prime_partial:A_BomoMG_comp41158_c1_seq15
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9349 O_BomoMG2637_5prime_partial:A_BomoMG_comp22099_c0_seq1
537bp
 PREDICTED:_nucleoporin_GLE1_[Plutella_xylostella]
GO:0000822 F inositol hexakisphosphate binding
GO:0003674 F molecular_function
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006406 P mRNA export from nucleus
GO:0006446 P regulation of translational initiation
GO:0006449 P regulation of translational termination
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031369 F translation initiation factor binding
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
9350 O_BomoMG26380_complete:A_BomoMG_comp41158_c1_seq16
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9351 O_BomoMG26382_5prime_partial:A_BomoMG_comp41158_c1_seq17
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9352 O_BomoMG26384_complete:A_BomoMG_comp41158_c1_seq19
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9353 O_BomoMG26386_complete:A_BomoMG_comp41158_c1_seq20
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9354 O_BomoMG26389_complete:A_BomoMG_comp41158_c1_seq22
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9355 O_BomoMG26391_complete:A_BomoMG_comp41158_c1_seq23
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9356 O_BomoMG26393_complete:A_BomoMG_comp41158_c1_seq24
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9357 O_BomoMG26395_5prime_partial:A_BomoMG_comp41158_c1_seq25
176bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
9358 O_BomoMG26398_complete:A_BomoMG_comp41158_c1_seq27
322bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0030140 C trans-Golgi network transport vesicle
GO:0042609 F CD4 receptor binding
9359 O_BomoMG26399_complete:A_BomoMG_comp41158_c1_seq27
306bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9360 O_BomoMG263_internal:A_BomoMG_comp17579_c0_seq1
125bp
 PREDICTED:_kinesin-like_protein_unc-104_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0008017 F microtubule binding
GO:0008088 P axo-dendritic transport
GO:0008089 P anterograde axonal transport
GO:0008152 P metabolic process
GO:0008345 P larval locomotory behavior
GO:0016188 P synaptic vesicle maturation
GO:0016192 P vesicle-mediated transport
GO:0016887 F ATP hydrolysis activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0032024 P positive regulation of insulin secretion
GO:0040012 P regulation of locomotion
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046847 P filopodium assembly
GO:0047496 P vesicle transport along microtubule
GO:0048489 P synaptic vesicle transport
GO:0048490 P anterograde synaptic vesicle transport
GO:0048814 P regulation of dendrite morphogenesis
GO:0051963 P regulation of synapse assembly
GO:1904115 C axon cytoplasm
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