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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9181 O_BomoMG26049_complete:A_BomoMG_comp41150_c1_seq42
151bp
9182 O_BomoMG2604_complete:A_BomoMG_comp22050_c0_seq1
115bp
 high_mobility_group_protein_A_[Bombyx_mori]
9183 O_BomoMG26052_complete:A_BomoMG_comp41150_c1_seq43
238bp
9184 O_BomoMG26054_complete:A_BomoMG_comp41150_c1_seq43
151bp
9185 O_BomoMG26057_complete:A_BomoMG_comp41150_c1_seq44
238bp
9186 O_BomoMG26059_complete:A_BomoMG_comp41150_c1_seq44
151bp
9187 O_BomoMG26064_complete:A_BomoMG_comp41150_c1_seq46
304bp
GO:0003824 F catalytic activity
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
9188 O_BomoMG26067_complete:A_BomoMG_comp41150_c1_seq48
238bp
9189 O_BomoMG26068_complete:A_BomoMG_comp41150_c1_seq48
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9190 O_BomoMG26069_complete:A_BomoMG_comp41150_c1_seq48
151bp
9191 O_BomoMG2606_complete:A_BomoMG_comp22056_c0_seq1
436bp
 Solute_carrier_family_41_member_1_[Operophtera_brumata]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0008324 F cation transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0098655 P cation transmembrane transport
9192 O_BomoMG26076_complete:A_BomoMG_comp41150_c1_seq52
238bp
9193 O_BomoMG26078_complete:A_BomoMG_comp41150_c1_seq52
151bp
9194 O_BomoMG2607_3prime_partial:A_BomoMG_comp22058_c0_seq1
302bp
 PREDICTED:_aprataxin_and_PNK-like_factor_isoform_X1_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0000166 F nucleotide binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0035861 C site of double-strand break
GO:0045191 P regulation of isotype switching
GO:0046872 F metal ion binding
GO:0051106 P positive regulation of DNA ligation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9195 O_BomoMG26084_complete:A_BomoMG_comp41150_c1_seq55
238bp
9196 O_BomoMG26085_complete:A_BomoMG_comp41150_c1_seq55
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9197 O_BomoMG26086_complete:A_BomoMG_comp41150_c1_seq55
151bp
9198 O_BomoMG26090_complete:A_BomoMG_comp41150_c1_seq57
238bp
9199 O_BomoMG26091_complete:A_BomoMG_comp41150_c1_seq57
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9200 O_BomoMG26092_complete:A_BomoMG_comp41150_c1_seq57
151bp
9201 O_BomoMG26098_complete:A_BomoMG_comp41150_c1_seq60
238bp
9202 O_BomoMG26099_complete:A_BomoMG_comp41150_c1_seq60
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9203 O_BomoMG2609_complete:A_BomoMG_comp22072_c0_seq1
195bp
 hypothetical_protein_KGM_08890_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9204 O_BomoMG260_5prime_partial:A_BomoMG_comp17577_c0_seq1
660bp
 minichromosome_maintenance_complex_component_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
9205 O_BomoMG26100_complete:A_BomoMG_comp41150_c1_seq60
151bp
9206 O_BomoMG26103_complete:A_BomoMG_comp41150_c1_seq61
238bp
9207 O_BomoMG26104_complete:A_BomoMG_comp41150_c1_seq61
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9208 O_BomoMG26105_complete:A_BomoMG_comp41150_c1_seq61
151bp
9209 O_BomoMG26109_complete:A_BomoMG_comp41150_c1_seq63
304bp
GO:0003824 F catalytic activity
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
9210 O_BomoMG26112_complete:A_BomoMG_comp41150_c1_seq64
304bp
GO:0003824 F catalytic activity
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
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