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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9121 O_BomoMG25917_complete:A_BomoMG_comp41148_c0_seq23
148bp
GO:0003824 F catalytic activity
GO:0004419 F hydroxymethylglutaryl-CoA lyase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
9122 O_BomoMG25918_complete:A_BomoMG_comp41148_c0_seq24
339bp
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004419 F hydroxymethylglutaryl-CoA lyase activity
GO:0005102 F signaling receptor binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0007005 P mitochondrion organization
GO:0016829 F lyase activity
GO:0030145 F manganese ion binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0046951 P ketone body biosynthetic process
GO:0051262 P protein tetramerization
9123 O_BomoMG25919_internal:A_BomoMG_comp41148_c2_seq1
122bp
9124 O_BomoMG2591_complete:A_BomoMG_comp22034_c0_seq1
651bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9125 O_BomoMG25920_3prime_partial:A_BomoMG_comp41148_c3_seq1
705bp
9126 O_BomoMG25922_internal:A_BomoMG_comp41149_c0_seq1
487bp
9127 O_BomoMG25923_5prime_partial:A_BomoMG_comp41149_c0_seq1
337bp
9128 O_BomoMG25925_3prime_partial:A_BomoMG_comp41149_c0_seq2
730bp
9129 O_BomoMG2592_complete:A_BomoMG_comp22034_c0_seq2
502bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
9130 O_BomoMG25931_complete:A_BomoMG_comp41150_c1_seq3
238bp
9131 O_BomoMG25932_complete:A_BomoMG_comp41150_c1_seq3
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9132 O_BomoMG25933_complete:A_BomoMG_comp41150_c1_seq3
151bp
9133 O_BomoMG25936_complete:A_BomoMG_comp41150_c1_seq4
304bp
GO:0003824 F catalytic activity
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
9134 O_BomoMG25946_complete:A_BomoMG_comp41150_c1_seq10
238bp
9135 O_BomoMG25948_complete:A_BomoMG_comp41150_c1_seq10
151bp
9136 O_BomoMG2594_complete:A_BomoMG_comp22035_c0_seq1
268bp
 PREDICTED:_neuralized-like_protein_2_isoform_X1_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005927 C muscle tendon junction
GO:0016567 P protein ubiquitination
GO:0030239 P myofibril assembly
GO:0030891 C VCB complex
GO:0035556 P intracellular signal transduction
GO:0045214 P sarcomere organization
9137 O_BomoMG25951_complete:A_BomoMG_comp41150_c1_seq11
304bp
GO:0003824 F catalytic activity
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
9138 O_BomoMG25954_complete:A_BomoMG_comp41150_c1_seq12
238bp
9139 O_BomoMG25956_complete:A_BomoMG_comp41150_c1_seq12
151bp
9140 O_BomoMG25960_complete:A_BomoMG_comp41150_c1_seq14
238bp
9141 O_BomoMG25962_complete:A_BomoMG_comp41150_c1_seq14
151bp
9142 O_BomoMG25965_complete:A_BomoMG_comp41150_c1_seq15
238bp
9143 O_BomoMG25966_complete:A_BomoMG_comp41150_c1_seq15
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9144 O_BomoMG25967_complete:A_BomoMG_comp41150_c1_seq15
151bp
9145 O_BomoMG25970_complete:A_BomoMG_comp41150_c1_seq16
238bp
9146 O_BomoMG25971_complete:A_BomoMG_comp41150_c1_seq16
157bp
GO:0003700 F DNA-binding transcription factor activity
GO:0005044 F scavenger receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0043565 F sequence-specific DNA binding
9147 O_BomoMG25972_complete:A_BomoMG_comp41150_c1_seq16
151bp
9148 O_BomoMG25975_complete:A_BomoMG_comp41150_c1_seq17
238bp
9149 O_BomoMG25977_complete:A_BomoMG_comp41150_c1_seq17
151bp
9150 O_BomoMG2597_complete:A_BomoMG_comp22044_c0_seq1
259bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
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