SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8611 O_BomoMG24923_complete:A_BomoMG_comp41099_c6_seq1
752bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
GO:0051693 P actin filament capping
8612 O_BomoMG24926_3prime_partial:A_BomoMG_comp41100_c4_seq2
207bp
8613 O_BomoMG24929_3prime_partial:A_BomoMG_comp41100_c4_seq7
207bp
8614 O_BomoMG2492_complete:A_BomoMG_comp21885_c0_seq1
263bp
 PREDICTED:_general_transcription_factor_IIF_subunit_2_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000991 F obsolete transcription factor activity, core RNA polymerase II binding
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
8615 O_BomoMG24930_3prime_partial:A_BomoMG_comp41100_c4_seq8
199bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
8616 O_BomoMG24932_5prime_partial:A_BomoMG_comp41100_c4_seq11
144bp
8617 O_BomoMG24935_3prime_partial:A_BomoMG_comp41100_c4_seq12
207bp
8618 O_BomoMG24936_complete:A_BomoMG_comp41100_c4_seq13
514bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
8619 O_BomoMG24937_5prime_partial:A_BomoMG_comp41100_c4_seq14
144bp
8620 O_BomoMG2493_complete:A_BomoMG_comp21886_c0_seq1
209bp
 basic_helix-loop-helix_type_transcription_factor_HLH54F_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001657 P ureteric bud development
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001763 P morphogenesis of a branching structure
GO:0001822 P kidney development
GO:0001944 P vasculature development
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007530 P sex determination
GO:0007548 P sex differentiation
GO:0009887 P animal organ morphogenesis
GO:0014707 P branchiomeric skeletal muscle development
GO:0030855 P epithelial cell differentiation
GO:0031063 P regulation of histone deacetylation
GO:0032835 P glomerulus development
GO:0042826 F histone deacetylase binding
GO:0043425 F bHLH transcription factor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
GO:0048286 P lung alveolus development
GO:0048536 P spleen development
GO:0048557 P embryonic digestive tract morphogenesis
GO:0048608 P reproductive structure development
GO:0048732 P gland development
GO:0050681 F androgen receptor binding
GO:0060008 P Sertoli cell differentiation
GO:0060021 P roof of mouth development
GO:0060425 P lung morphogenesis
GO:0060426 P lung vasculature development
GO:0060435 P bronchiole development
GO:0060539 P diaphragm development
GO:0060541 P respiratory system development
GO:0060766 P negative regulation of androgen receptor signaling pathway
GO:0070888 F E-box binding
GO:0072162 P metanephric mesenchymal cell differentiation
GO:0072277 P metanephric glomerular capillary formation
8621 O_BomoMG24940_complete:A_BomoMG_comp41100_c4_seq15
514bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
8622 O_BomoMG24942_3prime_partial:A_BomoMG_comp41100_c4_seq16
199bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
8623 O_BomoMG24944_complete:A_BomoMG_comp41100_c4_seq18
514bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
8624 O_BomoMG24946_complete:A_BomoMG_comp41100_c4_seq21
514bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
8625 O_BomoMG24947_5prime_partial:A_BomoMG_comp41100_c4_seq21
144bp
8626 O_BomoMG2494_complete:A_BomoMG_comp21887_c0_seq1
461bp
 PREDICTED:_zinc_carboxypeptidase-like_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
8627 O_BomoMG24950_5prime_partial:A_BomoMG_comp41100_c4_seq22
141bp
8628 O_BomoMG24954_3prime_partial:A_BomoMG_comp41100_c4_seq26
199bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
8629 O_BomoMG24955_complete:A_BomoMG_comp41101_c4_seq1
133bp
GO:0007605 P sensory perception of sound
8630 O_BomoMG24957_complete:A_BomoMG_comp41101_c8_seq1
109bp
8631 O_BomoMG24958_complete:A_BomoMG_comp41101_c8_seq2
104bp
8632 O_BomoMG24959_3prime_partial:A_BomoMG_comp41101_c8_seq3
518bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8633 O_BomoMG2495_complete:A_BomoMG_comp21897_c0_seq1
218bp
 uncharacterized_protein_LOC106122233_precursor_[Papilio_xuthus]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007517 P muscle organ development
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8634 O_BomoMG24960_complete:A_BomoMG_comp41101_c8_seq5
1144bp
8635 O_BomoMG24963_complete:A_BomoMG_comp41101_c8_seq6
1144bp
8636 O_BomoMG24966_3prime_partial:A_BomoMG_comp41101_c8_seq9
742bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8637 O_BomoMG24967_complete:A_BomoMG_comp41101_c8_seq9
543bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
8638 O_BomoMG24969_complete:A_BomoMG_comp41101_c8_seq13
107bp
8639 O_BomoMG24972_complete:A_BomoMG_comp41101_c13_seq2
474bp
8640 O_BomoMG24975_complete:A_BomoMG_comp41101_c14_seq1
703bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
previous next from show/16985

- SilkBase 1999-2023 -