Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7981	O_BomoMG23763_internal:A_BomoMG_comp41023_c0_seq20 179bp	Bomo_Chr20
7982	O_BomoMG23764_internal:A_BomoMG_comp41023_c0_seq23 502bp	Bomo_Chr20
7983	O_BomoMG23765_5prime_partial:A_BomoMG_comp41024_c0_seq2 1209bp	Bomo_Chr20		GO:0000166 F nucleotide binding GO:0000943 C retrotransposon nucleocapsid GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0003824 F catalytic activity GO:0003887 F DNA-directed DNA polymerase activity GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004523 F RNA-DNA hybrid ribonuclease activity GO:0004540 F ribonuclease activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006310 P DNA recombination GO:0006508 P proteolysis GO:0008152 P metabolic process GO:0008233 F peptidase activity GO:0008270 F zinc ion binding GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0019076 P viral release from host cell GO:0032197 P transposition, RNA-mediated GO:0046872 F metal ion binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
7984	O_BomoMG23767_3prime_partial:A_BomoMG_comp41024_c0_seq4 194bp	Bomo_Scaf104
7985	O_BomoMG23768_5prime_partial:A_BomoMG_comp41024_c0_seq5 1209bp	Bomo_Chr15		GO:0000166 F nucleotide binding GO:0000943 C retrotransposon nucleocapsid GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0003824 F catalytic activity GO:0003887 F DNA-directed DNA polymerase activity GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004523 F RNA-DNA hybrid ribonuclease activity GO:0004540 F ribonuclease activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006310 P DNA recombination GO:0006508 P proteolysis GO:0008152 P metabolic process GO:0008233 F peptidase activity GO:0008270 F zinc ion binding GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0019076 P viral release from host cell GO:0032197 P transposition, RNA-mediated GO:0046872 F metal ion binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
7986	O_BomoMG23772_5prime_partial:A_BomoMG_comp41025_c0_seq1 121bp	Bomo_Scaf421
7987	O_BomoMG23774_5prime_partial:A_BomoMG_comp41025_c0_seq2 178bp	Bomo_Scaf020
7988	O_BomoMG23778_5prime_partial:A_BomoMG_comp41025_c0_seq3 121bp	Bomo_Scaf224
7989	O_BomoMG2377_5prime_partial:A_BomoMG_comp21732_c0_seq2 101bp	Bomo_Chr20	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101736480_[Bombyx_mori]
7990	O_BomoMG23780_5prime_partial:A_BomoMG_comp41025_c0_seq4 212bp	Bomo_Scaf020
7991	O_BomoMG23782_5prime_partial:A_BomoMG_comp41025_c0_seq5 172bp	Bomo_Scaf020
7992	O_BomoMG23787_5prime_partial:A_BomoMG_comp41025_c0_seq6 106bp	Bomo_Scaf003
7993	O_BomoMG23788_3prime_partial:A_BomoMG_comp41025_c0_seq9 174bp	Bomo_Chr11		GO:0003723 F RNA binding GO:0003743 F translation initiation factor activity GO:0006412 P translation GO:0006413 P translational initiation GO:0006417 P regulation of translation GO:0006446 P regulation of translational initiation GO:0008135 F translation factor activity, RNA binding GO:0016281 C eukaryotic translation initiation factor 4F complex
7994	O_BomoMG2378_5prime_partial:A_BomoMG_comp21734_c0_seq1 407bp	Bomo_Chr2	PREDICTED:_uncharacterized_protein_LOC101735501_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0009405 P obsolete pathogenesis GO:0016020 C membrane GO:0031225 C anchored component of membrane
7995	O_BomoMG23791_5prime_partial:A_BomoMG_comp41025_c0_seq10 171bp	Bomo_Scaf131
7996	O_BomoMG23794_5prime_partial:A_BomoMG_comp41025_c0_seq11 147bp	Bomo_Scaf224
7997	O_BomoMG23797_5prime_partial:A_BomoMG_comp41025_c0_seq12 171bp	Bomo_Scaf020
7998	O_BomoMG237_internal:A_BomoMG_comp17530_c0_seq2 251bp	Bomo_Chr5	PREDICTED:_structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000724 P double-strand break repair via homologous recombination GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0030915 C Smc5-Smc6 complex GO:0033676 F double-stranded DNA helicase activity GO:0051321 P meiotic cell cycle
7999	O_BomoMG23801_5prime_partial:A_BomoMG_comp41025_c0_seq13 212bp	Bomo_Scaf131
8000	O_BomoMG23804_5prime_partial:A_BomoMG_comp41025_c0_seq14 154bp	Bomo_Scaf224
8001	O_BomoMG23807_5prime_partial:A_BomoMG_comp41025_c0_seq15 178bp	Bomo_Scaf020
8002	O_BomoMG23810_5prime_partial:A_BomoMG_comp41025_c0_seq17 179bp	Bomo_Scaf020
8003	O_BomoMG23812_5prime_partial:A_BomoMG_comp41025_c0_seq18 205bp	Bomo_Scaf020
8004	O_BomoMG23816_5prime_partial:A_BomoMG_comp41025_c0_seq19 212bp	Bomo_Scaf020
8005	O_BomoMG23819_5prime_partial:A_BomoMG_comp41025_c0_seq21 179bp	Bomo_Scaf131
8006	O_BomoMG23823_5prime_partial:A_BomoMG_comp41025_c0_seq22 121bp	Bomo_Scaf003
8007	O_BomoMG23825_5prime_partial:A_BomoMG_comp41025_c0_seq24 154bp	Bomo_Scaf003
8008	O_BomoMG23828_5prime_partial:A_BomoMG_comp41025_c0_seq26 114bp	Bomo_Scaf020
8009	O_BomoMG23830_5prime_partial:A_BomoMG_comp41025_c0_seq27 204bp	Bomo_Scaf020
8010	O_BomoMG23834_5prime_partial:A_BomoMG_comp41025_c0_seq30 114bp	Bomo_Scaf224