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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7891 O_BomoMG23607_3prime_partial:A_BomoMG_comp41013_c2_seq7
358bp
7892 O_BomoMG23609_internal:A_BomoMG_comp41013_c2_seq8
771bp
7893 O_BomoMG23614_5prime_partial:A_BomoMG_comp41013_c2_seq10
342bp
7894 O_BomoMG23618_complete:A_BomoMG_comp41014_c4_seq2
1168bp
7895 O_BomoMG23619_complete:A_BomoMG_comp41014_c4_seq2
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7896 O_BomoMG2361_complete:A_BomoMG_comp21719_c0_seq1
493bp
 PREDICTED:_arginyl-tRNA--protein_transferase_1_[Papilio_polytes]
GO:0004057 F arginyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016598 P protein arginylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
7897 O_BomoMG23620_3prime_partial:A_BomoMG_comp41014_c4_seq2
326bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7898 O_BomoMG23626_complete:A_BomoMG_comp41014_c4_seq3
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7899 O_BomoMG23627_3prime_partial:A_BomoMG_comp41014_c4_seq3
326bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7900 O_BomoMG2362_5prime_partial:A_BomoMG_comp21720_c0_seq1
351bp
 tyrosine-protein_phosphatase_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030027 C lamellipodium
GO:0030496 C midbody
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036312 F phosphatidylinositol 3-kinase regulatory subunit binding
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
7901 O_BomoMG23630_complete:A_BomoMG_comp41014_c4_seq5
542bp
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008273 F calcium, potassium:sodium antiporter activity
GO:0015293 F symporter activity
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030955 F potassium ion binding
GO:0031402 F sodium ion binding
GO:0032588 C trans-Golgi network membrane
GO:0034220 P ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042470 C melanosome
GO:0048021 P regulation of melanin biosynthetic process
GO:0048022 P negative regulation of melanin biosynthetic process
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
7902 O_BomoMG23631_complete:A_BomoMG_comp41014_c4_seq6
1168bp
7903 O_BomoMG23632_3prime_partial:A_BomoMG_comp41014_c4_seq6
504bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7904 O_BomoMG23633_complete:A_BomoMG_comp41014_c4_seq6
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7905 O_BomoMG23638_complete:A_BomoMG_comp41014_c4_seq7
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7906 O_BomoMG23639_complete:A_BomoMG_comp41014_c4_seq7
231bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7907 O_BomoMG23640_3prime_partial:A_BomoMG_comp41014_c4_seq7
171bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7908 O_BomoMG23642_3prime_partial:A_BomoMG_comp41014_c4_seq8
504bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7909 O_BomoMG23643_complete:A_BomoMG_comp41014_c4_seq8
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7910 O_BomoMG23645_complete:A_BomoMG_comp41014_c4_seq9
1168bp
7911 O_BomoMG23646_complete:A_BomoMG_comp41014_c4_seq9
432bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
7912 O_BomoMG23647_complete:A_BomoMG_comp41014_c4_seq9
231bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7913 O_BomoMG23648_3prime_partial:A_BomoMG_comp41014_c4_seq9
171bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7914 O_BomoMG2364_5prime_partial:A_BomoMG_comp21723_c0_seq1
1015bp
 PREDICTED:_DIS3-like_exonuclease_2_[Plutella_xylostella]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000287 F magnesium ion binding
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004540 F ribonuclease activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006364 P rRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008266 F poly(U) RNA binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010587 P miRNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019827 P stem cell population maintenance
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051306 P mitotic sister chromatid separation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:1990074 P polyuridylation-dependent mRNA catabolic process
7915 O_BomoMG23653_complete:A_BomoMG_comp41014_c4_seq10
511bp
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
7916 O_BomoMG23654_3prime_partial:A_BomoMG_comp41015_c1_seq1
486bp
7917 O_BomoMG23655_5prime_partial:A_BomoMG_comp41015_c1_seq1
279bp
7918 O_BomoMG23656_5prime_partial:A_BomoMG_comp41015_c1_seq2
279bp
7919 O_BomoMG23657_3prime_partial:A_BomoMG_comp41015_c1_seq3
199bp
7920 O_BomoMG23658_internal:A_BomoMG_comp41015_c1_seq4
372bp
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