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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7831 O_BomoMG23486_complete:A_BomoMG_comp41002_c6_seq12
419bp
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0031982 C vesicle
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
7832 O_BomoMG23488_complete:A_BomoMG_comp41002_c6_seq16
419bp
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0031982 C vesicle
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
7833 O_BomoMG2348_complete:A_BomoMG_comp21703_c0_seq1
489bp
 Facilitated_trehalose_transporter_Tret1_[Papilio_xuthus]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7834 O_BomoMG23490_5prime_partial:A_BomoMG_comp41002_c6_seq17
741bp
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0043547 P positive regulation of GTPase activity
7835 O_BomoMG23496_complete:A_BomoMG_comp41002_c6_seq24
419bp
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0031982 C vesicle
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
7836 O_BomoMG23498_complete:A_BomoMG_comp41002_c6_seq25
419bp
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0031982 C vesicle
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
7837 O_BomoMG23500_internal:A_BomoMG_comp41002_c6_seq27
402bp
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007165 P signal transduction
GO:0007229 P integrin-mediated signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043547 P positive regulation of GTPase activity
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
7838 O_BomoMG23505_5prime_partial:A_BomoMG_comp41003_c0_seq1
503bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
7839 O_BomoMG23507_3prime_partial:A_BomoMG_comp41003_c0_seq1
105bp
7840 O_BomoMG23508_3prime_partial:A_BomoMG_comp41003_c0_seq2
619bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
7841 O_BomoMG2350_5prime_partial:A_BomoMG_comp21704_c0_seq1
399bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_extracellular_sulfatase_SULF-1_homolog_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0007389 P pattern specification process
GO:0008045 P motor neuron axon guidance
GO:0008152 P metabolic process
GO:0008449 F N-acetylglucosamine-6-sulfatase activity
GO:0008484 F sulfuric ester hydrolase activity
GO:0009986 C cell surface
GO:0016201 P synaptic target inhibition
GO:0016787 F hydrolase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030202 P heparin metabolic process
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
7842 O_BomoMG23511_5prime_partial:A_BomoMG_comp41003_c1_seq1
284bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
7843 O_BomoMG23513_5prime_partial:A_BomoMG_comp41003_c1_seq2
284bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
7844 O_BomoMG23515_complete:A_BomoMG_comp41006_c0_seq1
601bp
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7845 O_BomoMG23516_complete:A_BomoMG_comp41006_c0_seq2
643bp
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7846 O_BomoMG23517_complete:A_BomoMG_comp41006_c0_seq3
596bp
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7847 O_BomoMG23518_complete:A_BomoMG_comp41006_c0_seq4
638bp
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7848 O_BomoMG23519_complete:A_BomoMG_comp41006_c1_seq1
285bp
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7849 O_BomoMG23521_complete:A_BomoMG_comp41006_c1_seq1
142bp
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
7850 O_BomoMG23522_complete:A_BomoMG_comp41006_c1_seq4
285bp
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7851 O_BomoMG23524_complete:A_BomoMG_comp41006_c1_seq4
142bp
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
7852 O_BomoMG23525_5prime_partial:A_BomoMG_comp41007_c0_seq1
812bp
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
7853 O_BomoMG23528_internal:A_BomoMG_comp41007_c1_seq1
844bp
7854 O_BomoMG23529_3prime_partial:A_BomoMG_comp41007_c1_seq3
578bp
7855 O_BomoMG2352_complete:A_BomoMG_comp21705_c0_seq1
424bp
 PREDICTED:_sphingosine-1-phosphate_phosphatase_1-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006665 P sphingolipid metabolic process
GO:0006668 P sphinganine-1-phosphate metabolic process
GO:0006670 P sphingosine metabolic process
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042392 F sphingosine-1-phosphate phosphatase activity
GO:0097191 P extrinsic apoptotic signaling pathway
GO:0097193 P intrinsic apoptotic signaling pathway
7856 O_BomoMG23531_internal:A_BomoMG_comp41007_c1_seq4
709bp
7857 O_BomoMG23533_complete:A_BomoMG_comp41009_c0_seq1
655bp
7858 O_BomoMG23535_complete:A_BomoMG_comp41009_c0_seq2
655bp
7859 O_BomoMG23537_complete:A_BomoMG_comp41009_c0_seq3
723bp
7860 O_BomoMG23539_3prime_partial:A_BomoMG_comp41009_c0_seq4
516bp
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