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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7621 O_BomoMG23088_3prime_partial:A_BomoMG_comp40967_c0_seq10
289bp
7622 O_BomoMG2308_complete:A_BomoMG_comp21640_c0_seq1
306bp
 suppressor_of_cytokine_signaling_6_[Bombyx_mori]
GO:0001772 C immunological synapse
GO:0005622 C intracellular anatomical structure
GO:0009968 P negative regulation of signal transduction
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0050868 P negative regulation of T cell activation
7623 O_BomoMG23090_5prime_partial:A_BomoMG_comp40968_c0_seq1
205bp
GO:0005432 F calcium:sodium antiporter activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0006851 P mitochondrial calcium ion transmembrane transport
GO:0007269 P neurotransmitter secretion
GO:0015386 F potassium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0035725 P sodium ion transmembrane transport
GO:0043022 F ribosome binding
GO:0046872 F metal ion binding
GO:0070584 P mitochondrion morphogenesis
GO:0071456 P cellular response to hypoxia
GO:0071805 P potassium ion transmembrane transport
GO:0098793 C presynapse
7624 O_BomoMG23092_complete:A_BomoMG_comp40968_c0_seq2
760bp
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
7625 O_BomoMG23095_5prime_partial:A_BomoMG_comp40970_c0_seq1
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7626 O_BomoMG23096_5prime_partial:A_BomoMG_comp40970_c0_seq2
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7627 O_BomoMG23097_5prime_partial:A_BomoMG_comp40970_c0_seq3
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7628 O_BomoMG230_internal:A_BomoMG_comp17527_c0_seq1
137bp
 nuclear_orphan_receptor_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0003713 F transcription coactivator activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0021549 P cerebellum development
GO:0030154 P cell differentiation
GO:0038066 P p38MAPK cascade
GO:0040019 P positive regulation of embryonic development
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045663 P positive regulation of myoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048520 P positive regulation of behavior
GO:0051321 P meiotic cell cycle
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
7629 O_BomoMG23102_5prime_partial:A_BomoMG_comp40970_c0_seq6
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7630 O_BomoMG23108_5prime_partial:A_BomoMG_comp40970_c0_seq10
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7631 O_BomoMG2310_internal:A_BomoMG_comp21645_c0_seq2
276bp
 Nibrin_[Operophtera_brumata]
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0004003 F DNA helicase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008134 F transcription factor binding
GO:0016233 P telomere capping
GO:0030870 C Mre11 complex
GO:0032508 P DNA duplex unwinding
GO:0042405 C nuclear inclusion body
GO:0042770 P signal transduction in response to DNA damage
GO:0047485 F protein N-terminus binding
GO:0048145 P regulation of fibroblast proliferation
GO:0051321 P meiotic cell cycle
7632 O_BomoMG23111_5prime_partial:A_BomoMG_comp40970_c0_seq12
220bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7633 O_BomoMG23118_3prime_partial:A_BomoMG_comp40971_c0_seq2
445bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
7634 O_BomoMG2311_3prime_partial:A_BomoMG_comp21648_c0_seq1
319bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_zinc_finger_protein_433-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7635 O_BomoMG23125_5prime_partial:A_BomoMG_comp40971_c3_seq7
124bp
7636 O_BomoMG23127_internal:A_BomoMG_comp40971_c3_seq8
118bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
7637 O_BomoMG23131_5prime_partial:A_BomoMG_comp40971_c3_seq11
123bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
7638 O_BomoMG23133_complete:A_BomoMG_comp40972_c0_seq2
182bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
7639 O_BomoMG23135_complete:A_BomoMG_comp40972_c0_seq3
182bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
7640 O_BomoMG23136_5prime_partial:A_BomoMG_comp40972_c0_seq4
330bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
7641 O_BomoMG23138_5prime_partial:A_BomoMG_comp40972_c0_seq5
340bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0006457 P protein folding
GO:0016853 F isomerase activity
7642 O_BomoMG23140_3prime_partial:A_BomoMG_comp40972_c2_seq1
632bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
7643 O_BomoMG23141_3prime_partial:A_BomoMG_comp40972_c2_seq2
254bp
7644 O_BomoMG23143_complete:A_BomoMG_comp40974_c0_seq1
194bp
7645 O_BomoMG23144_complete:A_BomoMG_comp40974_c0_seq2
2321bp
GO:0000166 F nucleotide binding
GO:0001221 F transcription coregulator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0036091 P positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress
7646 O_BomoMG23145_complete:A_BomoMG_comp40974_c0_seq2
1350bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001701 P in utero embryonic development
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0008013 F beta-catenin binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016055 P Wnt signaling pathway
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032508 P DNA duplex unwinding
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0048565 P digestive tract development
GO:0060070 P canonical Wnt signaling pathway
GO:0070016 F armadillo repeat domain binding
GO:0071339 C MLL1 complex
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000270 P negative regulation of fibroblast apoptotic process
7647 O_BomoMG23146_complete:A_BomoMG_comp40974_c0_seq3
1350bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001701 P in utero embryonic development
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0008013 F beta-catenin binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016055 P Wnt signaling pathway
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032508 P DNA duplex unwinding
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0048565 P digestive tract development
GO:0060070 P canonical Wnt signaling pathway
GO:0070016 F armadillo repeat domain binding
GO:0071339 C MLL1 complex
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000270 P negative regulation of fibroblast apoptotic process
7648 O_BomoMG23147_5prime_partial:A_BomoMG_comp40974_c0_seq3
1279bp
GO:0000166 F nucleotide binding
GO:0001221 F transcription coregulator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0036091 P positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress
7649 O_BomoMG2317_5prime_partial:A_BomoMG_comp21656_c0_seq1
329bp
 cuticular_protein_RR-2_motif_68_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
7650 O_BomoMG2318_3prime_partial:A_BomoMG_comp21666_c0_seq1
256bp
 PREDICTED:_phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0001525 P angiogenesis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002902 P regulation of B cell apoptotic process
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005161 F platelet-derived growth factor receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007270 P neuron-neuron synaptic transmission
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007626 P locomotory behavior
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009749 P response to glucose
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010033 P response to organic substance
GO:0010035 P response to inorganic substance
GO:0010043 P response to zinc ion
GO:0010975 P regulation of neuron projection development
GO:0010997 F anaphase-promoting complex binding
GO:0014070 P response to organic cyclic compound
GO:0016311 P dephosphorylation
GO:0016314 F phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021542 P dentate gyrus development
GO:0021955 P central nervous system neuron axonogenesis
GO:0030165 F PDZ domain binding
GO:0030336 P negative regulation of cell migration
GO:0030534 P adult behavior
GO:0031175 P neuron projection development
GO:0031642 P negative regulation of myelination
GO:0031647 P regulation of protein stability
GO:0031658 P obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0032286 P central nervous system myelin maintenance
GO:0032355 P response to estradiol
GO:0032535 P regulation of cellular component size
GO:0033032 P regulation of myeloid cell apoptotic process
GO:0033198 P response to ATP
GO:0033555 P multicellular organismal response to stress
GO:0035176 P social behavior
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0035749 C myelin sheath adaxonal region
GO:0036294 P cellular response to decreased oxygen levels
GO:0042493 P response to xenobiotic stimulus
GO:0042711 P maternal behavior
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043197 C dendritic spine
GO:0043220 C Schmidt-Lanterman incisure
GO:0043491 P protein kinase B signaling
GO:0043542 P endothelial cell migration
GO:0045211 C postsynaptic membrane
GO:0045471 P response to ethanol
GO:0045475 P locomotor rhythm
GO:0045792 P negative regulation of cell size
GO:0046621 P negative regulation of organ growth
GO:0046685 P response to arsenic-containing substance
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048679 P regulation of axon regeneration
GO:0048681 P negative regulation of axon regeneration
GO:0048738 P cardiac muscle tissue development
GO:0048853 P forebrain morphogenesis
GO:0048854 P brain morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050765 P negative regulation of phagocytosis
GO:0050771 P negative regulation of axonogenesis
GO:0050821 P protein stabilization
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0051726 P regulation of cell cycle
GO:0051800 F phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060024 P rhythmic synaptic transmission
GO:0060044 P negative regulation of cardiac muscle cell proliferation
GO:0060070 P canonical Wnt signaling pathway
GO:0060074 P synapse maturation
GO:0060134 P prepulse inhibition
GO:0060179 P male mating behavior
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0060341 P regulation of cellular localization
GO:0060736 P prostate gland growth
GO:0060997 P dendritic spine morphogenesis
GO:0061002 P negative regulation of dendritic spine morphogenesis
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071456 P cellular response to hypoxia
GO:0090071 P negative regulation of ribosome biogenesis
GO:0090344 P negative regulation of cell aging
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097105 P presynaptic membrane assembly
GO:0097107 P postsynaptic density assembly
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000808 P negative regulation of synaptic vesicle clustering
GO:2001235 P positive regulation of apoptotic signaling pathway
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