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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7561 O_BomoMG22_5prime_partial:A_BomoMG_comp16919_c1_seq1
105bp
 hypothetical_protein_[Leifsonia_aquatica]
7562 O_BomoMG23000_complete:A_BomoMG_comp40957_c0_seq7
337bp
GO:0016491 F oxidoreductase activity
GO:0042843 P D-xylose catabolic process
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
7563 O_BomoMG23001_complete:A_BomoMG_comp40957_c0_seq7
189bp
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007629 P flight behavior
GO:0008344 P adult locomotory behavior
GO:0008380 P RNA splicing
GO:0022618 P ribonucleoprotein complex assembly
GO:0032797 C SMN complex
GO:0034718 C SMN-Gemin2 complex
GO:0034730 C SmD-containing SMN-Sm protein complex
GO:0071254 C cytoplasmic U snRNP body
7564 O_BomoMG23002_complete:A_BomoMG_comp40957_c0_seq8
337bp
GO:0016491 F oxidoreductase activity
GO:0042843 P D-xylose catabolic process
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
7565 O_BomoMG23004_5prime_partial:A_BomoMG_comp40958_c0_seq1
163bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7566 O_BomoMG23006_complete:A_BomoMG_comp40958_c0_seq2
761bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7567 O_BomoMG23007_3prime_partial:A_BomoMG_comp40958_c0_seq3
589bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001827 P inner cell mass cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007281 P germ cell development
GO:0007566 P embryo implantation
GO:0008168 F methyltransferase activity
GO:0009566 P fertilization
GO:0010468 P regulation of gene expression
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030718 P germ-line stem cell population maintenance
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034972 P histone H3-R26 methylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 P regulation of DNA methylation
GO:0046872 F metal ion binding
GO:0048873 P homeostasis of number of cells within a tissue
GO:0060817 P inactivation of paternal X chromosome
7568 O_BomoMG23009_5prime_partial:A_BomoMG_comp40958_c0_seq4
168bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7569 O_BomoMG23011_3prime_partial:A_BomoMG_comp40958_c0_seq5
250bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007552 P metamorphosis
GO:0010977 P negative regulation of neuron projection development
GO:0035075 P response to ecdysone
GO:0045316 P negative regulation of compound eye photoreceptor development
GO:0046872 F metal ion binding
7570 O_BomoMG23012_3prime_partial:A_BomoMG_comp40958_c0_seq6
554bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001827 P inner cell mass cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007281 P germ cell development
GO:0007566 P embryo implantation
GO:0008168 F methyltransferase activity
GO:0009566 P fertilization
GO:0010468 P regulation of gene expression
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030718 P germ-line stem cell population maintenance
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034972 P histone H3-R26 methylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 P regulation of DNA methylation
GO:0046872 F metal ion binding
GO:0048873 P homeostasis of number of cells within a tissue
GO:0060817 P inactivation of paternal X chromosome
7571 O_BomoMG23014_3prime_partial:A_BomoMG_comp40958_c0_seq8
589bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001827 P inner cell mass cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007281 P germ cell development
GO:0007566 P embryo implantation
GO:0008168 F methyltransferase activity
GO:0009566 P fertilization
GO:0010468 P regulation of gene expression
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030718 P germ-line stem cell population maintenance
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034972 P histone H3-R26 methylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 P regulation of DNA methylation
GO:0046872 F metal ion binding
GO:0048873 P homeostasis of number of cells within a tissue
GO:0060817 P inactivation of paternal X chromosome
7572 O_BomoMG23016_3prime_partial:A_BomoMG_comp40958_c0_seq9
554bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001827 P inner cell mass cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007281 P germ cell development
GO:0007566 P embryo implantation
GO:0008168 F methyltransferase activity
GO:0009566 P fertilization
GO:0010468 P regulation of gene expression
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030718 P germ-line stem cell population maintenance
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034972 P histone H3-R26 methylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 P regulation of DNA methylation
GO:0046872 F metal ion binding
GO:0048873 P homeostasis of number of cells within a tissue
GO:0060817 P inactivation of paternal X chromosome
7573 O_BomoMG23017_complete:A_BomoMG_comp40958_c0_seq10
761bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7574 O_BomoMG23022_complete:A_BomoMG_comp40959_c3_seq2
107bp
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005845 C mRNA cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0032259 P methylation
GO:0036031 P recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex
7575 O_BomoMG23024_complete:A_BomoMG_comp40959_c3_seq4
107bp
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005845 C mRNA cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0032259 P methylation
GO:0036031 P recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex
7576 O_BomoMG23026_5prime_partial:A_BomoMG_comp40960_c0_seq1
156bp
7577 O_BomoMG23028_5prime_partial:A_BomoMG_comp40960_c0_seq1
105bp
7578 O_BomoMG23031_internal:A_BomoMG_comp40960_c2_seq1
275bp
7579 O_BomoMG23032_5prime_partial:A_BomoMG_comp40960_c9_seq2
139bp
7580 O_BomoMG23033_5prime_partial:A_BomoMG_comp40961_c4_seq1
349bp
7581 O_BomoMG23035_3prime_partial:A_BomoMG_comp40961_c4_seq2
107bp
7582 O_BomoMG23036_5prime_partial:A_BomoMG_comp40961_c4_seq5
113bp
7583 O_BomoMG23037_internal:A_BomoMG_comp40961_c4_seq7
254bp
7584 O_BomoMG23038_internal:A_BomoMG_comp40961_c4_seq9
254bp
7585 O_BomoMG23039_5prime_partial:A_BomoMG_comp40961_c4_seq10
349bp
7586 O_BomoMG2303_complete:A_BomoMG_comp21637_c0_seq1
276bp
 PREDICTED:_uncharacterized_protein_LOC106121342_[Papilio_xuthus]
7587 O_BomoMG23041_complete:A_BomoMG_comp40962_c0_seq1
1789bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
7588 O_BomoMG23045_complete:A_BomoMG_comp40962_c0_seq2
1812bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
7589 O_BomoMG23048_complete:A_BomoMG_comp40962_c0_seq3
374bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
7590 O_BomoMG23049_complete:A_BomoMG_comp40964_c3_seq1
771bp
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
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