Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7261	O_BomoMG2244_complete:A_BomoMG_comp21565_c0_seq1 441bp	Bomo_Chr18	PREDICTED:_protein_maelstrom_homolog_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0007275 P multicellular organism development GO:0030154 P cell differentiation GO:0031047 P gene silencing by RNA GO:0051321 P meiotic cell cycle
7262	O_BomoMG22452_5prime_partial:A_BomoMG_comp40918_c1_seq12 620bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7263	O_BomoMG22454_5prime_partial:A_BomoMG_comp40918_c1_seq13 261bp	Bomo_Chr1
7264	O_BomoMG22456_internal:A_BomoMG_comp40918_c1_seq14 663bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7265	O_BomoMG2245_complete:A_BomoMG_comp21565_c0_seq2 441bp	Bomo_Chr18	PREDICTED:_protein_maelstrom_homolog_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0007275 P multicellular organism development GO:0030154 P cell differentiation GO:0031047 P gene silencing by RNA GO:0051321 P meiotic cell cycle
7266	O_BomoMG22460_5prime_partial:A_BomoMG_comp40918_c1_seq15 663bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7267	O_BomoMG22461_complete:A_BomoMG_comp40918_c1_seq15 533bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0006468 P protein phosphorylation GO:0007399 P nervous system development GO:0007409 P axonogenesis GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019899 F enzyme binding GO:0035023 P regulation of Rho protein signal transduction GO:0035556 P intracellular signal transduction GO:0043005 C neuron projection GO:0043025 C neuronal cell body GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048471 C perinuclear region of cytoplasm GO:0050773 P regulation of dendrite development
7268	O_BomoMG22465_5prime_partial:A_BomoMG_comp40918_c1_seq16 592bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7269	O_BomoMG22469_complete:A_BomoMG_comp40918_c1_seq17 875bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005096 F GTPase activator activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0007399 P nervous system development GO:0015629 C actin cytoskeleton GO:0016192 P vesicle-mediated transport GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0035556 P intracellular signal transduction GO:0043065 P positive regulation of apoptotic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048013 P ephrin receptor signaling pathway GO:0051056 P regulation of small GTPase mediated signal transduction GO:0070062 C extracellular exosome
7270	O_BomoMG2246_internal:A_BomoMG_comp21567_c0_seq2 117bp	Bomo_Chr16	PREDICTED:_ataxin-2-like_protein_[Bombyx_mori]
7271	O_BomoMG22473_5prime_partial:A_BomoMG_comp40918_c1_seq18 951bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005096 F GTPase activator activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0007399 P nervous system development GO:0015629 C actin cytoskeleton GO:0016192 P vesicle-mediated transport GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0035556 P intracellular signal transduction GO:0043065 P positive regulation of apoptotic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048013 P ephrin receptor signaling pathway GO:0051056 P regulation of small GTPase mediated signal transduction GO:0070062 C extracellular exosome
7272	O_BomoMG22477_complete:A_BomoMG_comp40918_c1_seq19 946bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005096 F GTPase activator activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0007399 P nervous system development GO:0015629 C actin cytoskeleton GO:0016192 P vesicle-mediated transport GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0035556 P intracellular signal transduction GO:0043065 P positive regulation of apoptotic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048013 P ephrin receptor signaling pathway GO:0051056 P regulation of small GTPase mediated signal transduction GO:0070062 C extracellular exosome
7273	O_BomoMG22478_complete:A_BomoMG_comp40918_c1_seq19 533bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0006468 P protein phosphorylation GO:0007399 P nervous system development GO:0007409 P axonogenesis GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019899 F enzyme binding GO:0035023 P regulation of Rho protein signal transduction GO:0035556 P intracellular signal transduction GO:0043005 C neuron projection GO:0043025 C neuronal cell body GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048471 C perinuclear region of cytoplasm GO:0050773 P regulation of dendrite development
7274	O_BomoMG22482_5prime_partial:A_BomoMG_comp40918_c1_seq20 564bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7275	O_BomoMG22486_5prime_partial:A_BomoMG_comp40918_c1_seq21 1161bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7276	O_BomoMG2248_3prime_partial:A_BomoMG_comp21570_c0_seq1 477bp	Bomo_Chr8	PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]	GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0000932 C P-body GO:0001829 P trophectodermal cell differentiation GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006417 P regulation of translation GO:0007275 P multicellular organism development GO:0017148 P negative regulation of translation GO:0030014 C CCR4-NOT complex GO:0030015 C CCR4-NOT core complex GO:0031047 P gene silencing by RNA GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway GO:2000036 P regulation of stem cell population maintenance
7277	O_BomoMG22491_internal:A_BomoMG_comp40918_c2_seq1 197bp	Bomo_Chr1		GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
7278	O_BomoMG22494_complete:A_BomoMG_comp40922_c0_seq1 767bp	Bomo_Scaf081		GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7279	O_BomoMG22496_complete:A_BomoMG_comp40922_c0_seq2 499bp	Bomo_Scaf165		GO:0003677 F DNA binding GO:0004864 F protein phosphatase inhibitor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0043086 P negative regulation of catalytic activity GO:0046872 F metal ion binding
7280	O_BomoMG22497_5prime_partial:A_BomoMG_comp40922_c0_seq2 292bp	Bomo_Scaf165		GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006629 P lipid metabolic process GO:0006644 P phospholipid metabolic process GO:0007519 P skeletal muscle tissue development GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7281	O_BomoMG224_3prime_partial:A_BomoMG_comp17502_c0_seq1 141bp	Bomo_Chr23	PREDICTED:_methionine_synthase_reductase-like_isoform_X1_[Amyelois_transitella]	GO:0000096 P sulfur amino acid metabolic process GO:0003958 F NADPH-hemoprotein reductase activity GO:0005506 F iron ion binding GO:0005515 F protein binding GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006306 P DNA methylation GO:0006555 P methionine metabolic process GO:0008652 P cellular amino acid biosynthetic process GO:0009086 P methionine biosynthetic process GO:0009235 P cobalamin metabolic process GO:0010181 F FMN binding GO:0016491 F oxidoreductase activity GO:0016723 F oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor GO:0030586 F [methionine synthase] reductase activity GO:0032259 P methylation GO:0033353 P S-adenosylmethionine cycle GO:0043418 P homocysteine catabolic process GO:0045111 C intermediate filament cytoskeleton GO:0046655 P folic acid metabolic process GO:0050444 F obsolete aquacobalamin reductase (NADPH) activity GO:0050660 F flavin adenine dinucleotide binding GO:0050661 F NADP binding GO:0055114 P obsolete oxidation-reduction process GO:0070402 F NADPH binding GO:0071949 F FAD binding GO:1904042 P negative regulation of cystathionine beta-synthase activity
7282	O_BomoMG22500_complete:A_BomoMG_comp40922_c0_seq3 287bp	Bomo_Scaf243		GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7283	O_BomoMG22502_5prime_partial:A_BomoMG_comp40922_c0_seq4 469bp	Bomo_Scaf243		GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7284	O_BomoMG22504_complete:A_BomoMG_comp40922_c0_seq5 499bp	Bomo_Scaf081		GO:0003677 F DNA binding GO:0004864 F protein phosphatase inhibitor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0043086 P negative regulation of catalytic activity GO:0046872 F metal ion binding
7285	O_BomoMG22507_complete:A_BomoMG_comp40922_c0_seq5 110bp	Bomo_Scaf081		GO:0005623 C obsolete cell GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7286	O_BomoMG22508_complete:A_BomoMG_comp40922_c0_seq6 1015bp	Bomo_Scaf165		GO:0003677 F DNA binding GO:0004864 F protein phosphatase inhibitor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0043086 P negative regulation of catalytic activity GO:0046872 F metal ion binding
7287	O_BomoMG2250_5prime_partial:A_BomoMG_comp21570_c0_seq2 174bp	Bomo_Chr8	PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]	GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening GO:0000932 C P-body GO:0001829 P trophectodermal cell differentiation GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006417 P regulation of translation GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest GO:0007275 P multicellular organism development GO:0017148 P negative regulation of translation GO:0030014 C CCR4-NOT complex GO:0030015 C CCR4-NOT core complex GO:0031047 P gene silencing by RNA GO:2000036 P regulation of stem cell population maintenance
7288	O_BomoMG22511_complete:A_BomoMG_comp40922_c0_seq7 625bp	Bomo_Chr4		GO:0003677 F DNA binding GO:0004864 F protein phosphatase inhibitor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0043086 P negative regulation of catalytic activity GO:0046872 F metal ion binding
7289	O_BomoMG22512_complete:A_BomoMG_comp40922_c0_seq8 590bp	Bomo_Scaf081		GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006629 P lipid metabolic process GO:0008081 F phosphoric diester hydrolase activity GO:0008889 F glycerophosphodiester phosphodiesterase activity GO:0016787 F hydrolase activity GO:0030246 F carbohydrate binding GO:0030643 P cellular phosphate ion homeostasis GO:0046475 P glycerophospholipid catabolic process GO:0047389 F glycerophosphocholine phosphodiesterase activity GO:2001070 F starch binding
7290	O_BomoMG22513_complete:A_BomoMG_comp40922_c0_seq8 499bp	Bomo_Scaf081		GO:0003677 F DNA binding GO:0004864 F protein phosphatase inhibitor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0043086 P negative regulation of catalytic activity GO:0046872 F metal ion binding