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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6451 O_BomoMG21029_complete:A_BomoMG_comp40778_c0_seq1
1221bp
6452 O_BomoMG2102_5prime_partial:A_BomoMG_comp21310_c0_seq1
132bp
 PREDICTED:_protein_prenyltransferase_alpha_subunit_repeat-containing_protein_1_[Amyelois_transitella]
6453 O_BomoMG21030_5prime_partial:A_BomoMG_comp40778_c0_seq1
501bp
6454 O_BomoMG21037_internal:A_BomoMG_comp40778_c0_seq2
217bp
6455 O_BomoMG21039_3prime_partial:A_BomoMG_comp40779_c0_seq1
350bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6456 O_BomoMG2103_internal:A_BomoMG_comp21314_c1_seq1
245bp
 Uncharacterized_protein_OBRU01_02606_[Operophtera_brumata]
6457 O_BomoMG21041_internal:A_BomoMG_comp40779_c0_seq2
221bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6458 O_BomoMG21042_3prime_partial:A_BomoMG_comp40779_c0_seq3
407bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6459 O_BomoMG21045_complete:A_BomoMG_comp40779_c0_seq4
112bp
6460 O_BomoMG21046_internal:A_BomoMG_comp40779_c0_seq5
106bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6461 O_BomoMG21047_internal:A_BomoMG_comp40779_c0_seq6
164bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6462 O_BomoMG21048_complete:A_BomoMG_comp40779_c0_seq7
156bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6463 O_BomoMG21049_complete:A_BomoMG_comp40779_c0_seq8
112bp
6464 O_BomoMG2104_internal:A_BomoMG_comp21316_c0_seq1
355bp
 PREDICTED:_S1_RNA-binding_domain-containing_protein_1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0006139 P nucleobase-containing compound metabolic process
6465 O_BomoMG21051_5prime_partial:A_BomoMG_comp40780_c0_seq1
405bp
GO:0005515 F protein binding
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization
GO:0051015 F actin filament binding
6466 O_BomoMG21052_3prime_partial:A_BomoMG_comp40780_c0_seq3
124bp
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0015629 C actin cytoskeleton
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030036 P actin cytoskeleton organization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035767 P endothelial cell chemotaxis
GO:0036120 P cellular response to platelet-derived growth factor stimulus
GO:0042060 P wound healing
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071672 P negative regulation of smooth muscle cell chemotaxis
GO:0071933 F Arp2/3 complex binding
GO:0071944 C cell periphery
GO:0090135 P actin filament branching
GO:1902463 P protein localization to cell leading edge
GO:2000394 P positive regulation of lamellipodium morphogenesis
6467 O_BomoMG21053_complete:A_BomoMG_comp40781_c0_seq2
399bp
6468 O_BomoMG21057_5prime_partial:A_BomoMG_comp40781_c0_seq3
287bp
6469 O_BomoMG21060_complete:A_BomoMG_comp40781_c0_seq4
444bp
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0030173 C integral component of Golgi membrane
GO:0033188 F sphingomyelin synthase activity
GO:0047493 F ceramide cholinephosphotransferase activity
6470 O_BomoMG21062_complete:A_BomoMG_comp40781_c0_seq4
143bp
6471 O_BomoMG21064_complete:A_BomoMG_comp40781_c0_seq5
269bp
6472 O_BomoMG21067_complete:A_BomoMG_comp40781_c0_seq6
444bp
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0030173 C integral component of Golgi membrane
GO:0033188 F sphingomyelin synthase activity
GO:0047493 F ceramide cholinephosphotransferase activity
6473 O_BomoMG2106_5prime_partial:A_BomoMG_comp21316_c0_seq2
104bp
 PREDICTED:_S1_RNA-binding_domain-containing_protein_1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008150 P biological_process
6474 O_BomoMG21070_complete:A_BomoMG_comp40782_c0_seq1
667bp
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
6475 O_BomoMG21071_complete:A_BomoMG_comp40782_c0_seq1
136bp
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
6476 O_BomoMG21072_complete:A_BomoMG_comp40782_c0_seq2
826bp
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
6477 O_BomoMG21073_complete:A_BomoMG_comp40782_c0_seq3
826bp
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
6478 O_BomoMG21074_complete:A_BomoMG_comp40782_c0_seq4
667bp
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
6479 O_BomoMG21075_complete:A_BomoMG_comp40782_c0_seq4
136bp
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
6480 O_BomoMG21076_5prime_partial:A_BomoMG_comp40783_c1_seq1
1122bp
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
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