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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6271 O_BomoMG20701_3prime_partial:A_BomoMG_comp40732_c1_seq1
836bp
GO:0003980 F UDP-glucose:glycoprotein glucosyltransferase activity
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005791 C rough endoplasmic reticulum
GO:0006486 P protein glycosylation
GO:0012505 C endomembrane system
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097359 P UDP-glucosylation
6272 O_BomoMG20702_3prime_partial:A_BomoMG_comp40732_c1_seq2
424bp
GO:0003980 F UDP-glucose:glycoprotein glucosyltransferase activity
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005791 C rough endoplasmic reticulum
GO:0006486 P protein glycosylation
GO:0012505 C endomembrane system
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097359 P UDP-glucosylation
6273 O_BomoMG20703_5prime_partial:A_BomoMG_comp40732_c2_seq1
365bp
GO:0003980 F UDP-glucose:glycoprotein glucosyltransferase activity
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005791 C rough endoplasmic reticulum
GO:0006486 P protein glycosylation
GO:0012505 C endomembrane system
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097359 P UDP-glucosylation
6274 O_BomoMG20704_complete:A_BomoMG_comp40735_c0_seq1
1195bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0051301 P cell division
6275 O_BomoMG20707_complete:A_BomoMG_comp40735_c0_seq2
1195bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0051301 P cell division
6276 O_BomoMG2070_internal:A_BomoMG_comp21237_c0_seq1
196bp
 PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Amyelois_transitella]
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
6277 O_BomoMG20710_complete:A_BomoMG_comp40735_c0_seq3
1188bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0051301 P cell division
6278 O_BomoMG20713_complete:A_BomoMG_comp40735_c0_seq4
1188bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0051301 P cell division
6279 O_BomoMG20716_complete:A_BomoMG_comp40736_c0_seq1
709bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6280 O_BomoMG20718_complete:A_BomoMG_comp40736_c0_seq3
696bp
GO:0005515 F protein binding
6281 O_BomoMG2071_internal:A_BomoMG_comp21243_c0_seq1
338bp
 PREDICTED:_kinesin-like_protein_unc-104_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0047496 P vesicle transport along microtubule
GO:0048489 P synaptic vesicle transport
6282 O_BomoMG20720_internal:A_BomoMG_comp40737_c0_seq2
649bp
6283 O_BomoMG20723_internal:A_BomoMG_comp40737_c0_seq3
438bp
GO:0044822 F RNA binding
6284 O_BomoMG20726_internal:A_BomoMG_comp40737_c0_seq4
458bp
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060013 P righting reflex
GO:0098582 P innate vocalization behavior
GO:2000620 P positive regulation of histone H4-K16 acetylation
6285 O_BomoMG20729_internal:A_BomoMG_comp40737_c0_seq5
438bp
GO:0044822 F RNA binding
6286 O_BomoMG20733_internal:A_BomoMG_comp40737_c0_seq6
458bp
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060013 P righting reflex
GO:0098582 P innate vocalization behavior
GO:2000620 P positive regulation of histone H4-K16 acetylation
6287 O_BomoMG20739_5prime_partial:A_BomoMG_comp40738_c1_seq1
749bp
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0008293 P torso signaling pathway
GO:0008333 P endosome to lysosome transport
GO:0008593 P regulation of Notch signaling pathway
GO:0016050 P vesicle organization
GO:0016079 P synaptic vesicle exocytosis
GO:0016082 P synaptic vesicle priming
GO:0016197 P endosomal transport
GO:0016322 P neuron remodeling
GO:0031398 P positive regulation of protein ubiquitination
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0033565 C ESCRT-0 complex
GO:0033619 P membrane protein proteolysis
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway
GO:0045752 P positive regulation of Toll signaling pathway
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051726 P regulation of cell cycle
GO:1990182 P exosomal secretion
GO:2000274 P regulation of epithelial cell migration, open tracheal system
6288 O_BomoMG20741_internal:A_BomoMG_comp40739_c0_seq2
329bp
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0097352 P autophagosome maturation
6289 O_BomoMG20745_internal:A_BomoMG_comp40739_c0_seq3
337bp
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0097352 P autophagosome maturation
6290 O_BomoMG20749_5prime_partial:A_BomoMG_comp40740_c0_seq1
595bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0046856 P phosphatidylinositol dephosphorylation
6291 O_BomoMG2074_internal:A_BomoMG_comp21249_c0_seq1
194bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
6292 O_BomoMG20751_complete:A_BomoMG_comp40740_c0_seq2
599bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008088 P axo-dendritic transport
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031122 P cytoplasmic microtubule organization
GO:0042578 F phosphoric ester hydrolase activity
GO:0043025 C neuronal cell body
GO:0046329 P negative regulation of JNK cascade
GO:0046488 P phosphatidylinositol metabolic process
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0052866 F phosphatidylinositol phosphate phosphatase activity
GO:0060074 P synapse maturation
GO:0060439 P trachea morphogenesis
GO:0071683 C sensory dendrite
6293 O_BomoMG20755_complete:A_BomoMG_comp40741_c0_seq4
342bp
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0042589 C zymogen granule membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0045202 C synapse
GO:0055038 C recycling endosome membrane
6294 O_BomoMG20756_complete:A_BomoMG_comp40742_c0_seq2
130bp
GO:0005125 F cytokine activity
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
6295 O_BomoMG20757_5prime_partial:A_BomoMG_comp40743_c0_seq1
441bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6296 O_BomoMG20758_complete:A_BomoMG_comp40743_c0_seq1
114bp
6297 O_BomoMG2075_5prime_partial:A_BomoMG_comp21250_c0_seq1
303bp
 PREDICTED:_polyribonucleotide_nucleotidyltransferase_1,_mitochondrial_[Amyelois_transitella]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000957 P mitochondrial RNA catabolic process
GO:0000958 P mitochondrial mRNA catabolic process
GO:0000962 P positive regulation of mitochondrial RNA catabolic process
GO:0000964 P mitochondrial RNA 5'-end processing
GO:0000965 P mitochondrial RNA 3'-end processing
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004654 F polyribonucleotide nucleotidyltransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0006402 P mRNA catabolic process
GO:0006810 P transport
GO:0008266 F poly(U) RNA binding
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0034046 F poly(G) binding
GO:0034599 P cellular response to oxidative stress
GO:0035198 F miRNA binding
GO:0035458 P cellular response to interferon-beta
GO:0035927 P RNA import into mitochondrion
GO:0035928 P rRNA import into mitochondrion
GO:0043457 P regulation of cellular respiration
GO:0043631 P RNA polyadenylation
GO:0044822 F RNA binding
GO:0045025 C mitochondrial degradosome
GO:0045926 P negative regulation of growth
GO:0051260 P protein homooligomerization
GO:0061014 P positive regulation of mRNA catabolic process
GO:0070207 P protein homotrimerization
GO:0070584 P mitochondrion morphogenesis
GO:0071042 P nuclear polyadenylation-dependent mRNA catabolic process
GO:0071850 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:0097222 P mitochondrial mRNA polyadenylation
GO:2000627 P positive regulation of miRNA catabolic process
GO:2000772 P regulation of cellular senescence
6298 O_BomoMG20760_complete:A_BomoMG_comp40743_c0_seq2
397bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6299 O_BomoMG20762_5prime_partial:A_BomoMG_comp40743_c0_seq3
408bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6300 O_BomoMG20764_complete:A_BomoMG_comp40743_c0_seq4
430bp
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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