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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5971 O_BomoMG20149_5prime_partial:A_BomoMG_comp40681_c0_seq3
252bp
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5972 O_BomoMG2014_complete:A_BomoMG_comp21173_c0_seq1
474bp
 PREDICTED:_proton-coupled_amino_acid_transporter_1-like_[Bombyx_mori]
GO:0005280 F amino acid:proton symporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:1902600 P proton transmembrane transport
5973 O_BomoMG20150_complete:A_BomoMG_comp40681_c0_seq3
104bp
5974 O_BomoMG20153_internal:A_BomoMG_comp40681_c4_seq1
114bp
5975 O_BomoMG20154_internal:A_BomoMG_comp40681_c4_seq2
112bp
5976 O_BomoMG20155_3prime_partial:A_BomoMG_comp40682_c0_seq1
413bp
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
5977 O_BomoMG20157_3prime_partial:A_BomoMG_comp40682_c0_seq2
414bp
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
5978 O_BomoMG20158_complete:A_BomoMG_comp40683_c1_seq1
400bp
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008150 P biological_process
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
5979 O_BomoMG20159_complete:A_BomoMG_comp40683_c1_seq2
824bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
5980 O_BomoMG20161_complete:A_BomoMG_comp40683_c1_seq4
352bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
5981 O_BomoMG20163_5prime_partial:A_BomoMG_comp40684_c1_seq3
116bp
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
5982 O_BomoMG20164_complete:A_BomoMG_comp40684_c1_seq4
112bp
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
5983 O_BomoMG20165_complete:A_BomoMG_comp40685_c0_seq1
146bp
5984 O_BomoMG20167_5prime_partial:A_BomoMG_comp40685_c3_seq6
273bp
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
5985 O_BomoMG2016_internal:A_BomoMG_comp21178_c0_seq1
288bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_8-like_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5986 O_BomoMG20170_5prime_partial:A_BomoMG_comp40685_c3_seq7
248bp
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
5987 O_BomoMG20174_5prime_partial:A_BomoMG_comp40685_c3_seq14
100bp
5988 O_BomoMG20175_5prime_partial:A_BomoMG_comp40685_c3_seq15
121bp
5989 O_BomoMG20177_5prime_partial:A_BomoMG_comp40685_c5_seq1
351bp
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
5990 O_BomoMG20178_5prime_partial:A_BomoMG_comp40685_c7_seq1
340bp
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030120 C vesicle coat
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0031410 C cytoplasmic vesicle
GO:0036498 P IRE1-mediated unfolded protein response
GO:0043231 C intracellular membrane-bounded organelle
GO:0048208 P COPII vesicle coating
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051592 P response to calcium ion
GO:0070971 C endoplasmic reticulum exit site
5991 O_BomoMG2017_internal:A_BomoMG_comp21184_c0_seq1
173bp
 PREDICTED:_uncharacterized_protein_LOC101743230_[Bombyx_mori]
5992 O_BomoMG20181_complete:A_BomoMG_comp40686_c0_seq1
840bp
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
5993 O_BomoMG20183_internal:A_BomoMG_comp40687_c0_seq1
504bp
5994 O_BomoMG20187_5prime_partial:A_BomoMG_comp40687_c0_seq2
225bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017137 F small GTPase binding
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019898 C extrinsic component of membrane
GO:0019905 F syntaxin binding
GO:0030141 C secretory granule
GO:0030276 F clathrin binding
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0031410 C cytoplasmic vesicle
GO:0042043 F neurexin family protein binding
GO:0045921 P positive regulation of exocytosis
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0050714 P positive regulation of protein secretion
GO:0070382 C exocytic vesicle
GO:0071985 P multivesicular body sorting pathway
GO:0098793 C presynapse
5995 O_BomoMG20188_internal:A_BomoMG_comp40687_c0_seq3
829bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017137 F small GTPase binding
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019898 C extrinsic component of membrane
GO:0019905 F syntaxin binding
GO:0030141 C secretory granule
GO:0030276 F clathrin binding
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0031410 C cytoplasmic vesicle
GO:0042043 F neurexin family protein binding
GO:0045921 P positive regulation of exocytosis
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0050714 P positive regulation of protein secretion
GO:0070382 C exocytic vesicle
GO:0071985 P multivesicular body sorting pathway
GO:0098793 C presynapse
5996 O_BomoMG2018_internal:A_BomoMG_comp21188_c1_seq1
411bp
 A_Chain_A,_Crystal_Structure_Of_The_Carboxypeptidase_A_From_Helicoverpa_Armigera
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5997 O_BomoMG20191_5prime_partial:A_BomoMG_comp40688_c0_seq1
118bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008270 F zinc ion binding
GO:0008610 P lipid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0016042 P lipid catabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0034440 P lipid oxidation
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
5998 O_BomoMG20193_complete:A_BomoMG_comp40688_c0_seq2
467bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008270 F zinc ion binding
GO:0008610 P lipid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0016042 P lipid catabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0034440 P lipid oxidation
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
5999 O_BomoMG20197_complete:A_BomoMG_comp40688_c0_seq4
437bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008270 F zinc ion binding
GO:0008610 P lipid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0016042 P lipid catabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0034440 P lipid oxidation
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
6000 O_BomoMG2019_5prime_partial:A_BomoMG_comp21189_c0_seq1
173bp
 PREDICTED:_uncharacterized_protein_LOC101739918_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
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