Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
5821	O_BomoMG19870_3prime_partial:A_BomoMG_comp40657_c3_seq6 140bp	Bomo_Chr1
5822	O_BomoMG19871_complete:A_BomoMG_comp40657_c3_seq7 490bp	Bomo_Chr1		GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005911 C cell-cell junction GO:0016020 C membrane GO:0030027 C lamellipodium GO:0030054 C cell junction GO:0030139 C endocytic vesicle GO:0035023 P regulation of Rho protein signal transduction GO:0035767 P endothelial cell chemotaxis GO:0042995 C cell projection GO:0043547 P positive regulation of GTPase activity GO:0048471 C perinuclear region of cytoplasm
5823	O_BomoMG19872_5prime_partial:A_BomoMG_comp40657_c3_seq7 194bp	Bomo_Chr1
5824	O_BomoMG19873_complete:A_BomoMG_comp40657_c3_seq8 408bp	Bomo_Chr1
5825	O_BomoMG19874_complete:A_BomoMG_comp40657_c3_seq8 293bp	Bomo_Chr1
5826	O_BomoMG19875_complete:A_BomoMG_comp40657_c3_seq9 293bp	Bomo_Chr1
5827	O_BomoMG19876_3prime_partial:A_BomoMG_comp40657_c3_seq9 180bp	Bomo_Chr1
5828	O_BomoMG19877_5prime_partial:A_BomoMG_comp40657_c3_seq10 421bp	Bomo_Chr1
5829	O_BomoMG19878_complete:A_BomoMG_comp40657_c3_seq11 368bp	Bomo_Chr1
5830	O_BomoMG19879_3prime_partial:A_BomoMG_comp40657_c3_seq11 180bp	Bomo_Chr1
5831	O_BomoMG1987_5prime_partial:A_BomoMG_comp21127_c0_seq1 349bp	Bomo_Chr3	PREDICTED:_uncharacterized_protein_LOC106126763_isoform_X2_[Papilio_xuthus]	GO:0000118 C histone deacetylase complex GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006915 P apoptotic process GO:0007275 P multicellular organism development GO:0016235 C aggresome GO:0016607 C nuclear speck GO:0018024 F histone-lysine N-methyltransferase activity GO:0030154 P cell differentiation GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0034968 P histone lysine methylation GO:0042803 F protein homodimerization activity GO:0043069 P negative regulation of programmed cell death GO:0043231 C intracellular membrane-bounded organelle GO:0045892 P negative regulation of transcription, DNA-templated GO:0045893 P positive regulation of transcription, DNA-templated GO:0046329 P negative regulation of JNK cascade GO:0046872 F metal ion binding GO:0051726 P regulation of cell cycle GO:0071425 P hematopoietic stem cell proliferation
5832	O_BomoMG19880_internal:A_BomoMG_comp40657_c3_seq13 193bp	Bomo_Chr1
5833	O_BomoMG19881_complete:A_BomoMG_comp40658_c0_seq1 703bp	Bomo_Chr16
5834	O_BomoMG19882_5prime_partial:A_BomoMG_comp40658_c0_seq2 167bp	Bomo_Scaf015
5835	O_BomoMG19884_3prime_partial:A_BomoMG_comp40659_c0_seq1 102bp	Bomo_Chr18		GO:0003677 F DNA binding GO:0003730 F mRNA 3'-UTR binding GO:0005634 C nucleus GO:0005829 C cytosol GO:0010629 P negative regulation of gene expression GO:0016246 P RNA interference GO:0035925 F mRNA 3'-UTR AU-rich region binding GO:0046872 F metal ion binding GO:0061158 P 3'-UTR-mediated mRNA destabilization GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
5836	O_BomoMG19885_5prime_partial:A_BomoMG_comp40659_c0_seq3 160bp	Bomo_Chr18		GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0001570 P vasculogenesis GO:0003342 P proepicardium development GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003729 F mRNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006402 P mRNA catabolic process GO:0006417 P regulation of translation GO:0006915 P apoptotic process GO:0007507 P heart development GO:0008283 P cell population proliferation GO:0017091 F mRNA 3'-UTR AU-rich region binding GO:0021915 P neural tube development GO:0033077 P T cell differentiation in thymus GO:0035264 P multicellular organism growth GO:0043488 P regulation of mRNA stability GO:0044822 F RNA binding GO:0046872 F metal ion binding GO:0048568 P embryonic organ development GO:0060710 P chorio-allantoic fusion GO:0060712 P spongiotrophoblast layer development
5837	O_BomoMG19886_complete:A_BomoMG_comp40660_c0_seq2 142bp	Bomo_Chr4		GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0006810 P transport GO:0016020 C membrane
5838	O_BomoMG19887_complete:A_BomoMG_comp40660_c0_seq2 134bp	Bomo_Chr4
5839	O_BomoMG19888_complete:A_BomoMG_comp40660_c0_seq4 134bp	Bomo_Chr4
5840	O_BomoMG1988_internal:A_BomoMG_comp21131_c0_seq1 251bp	Bomo_Chr3	PREDICTED:_uncharacterized_protein_LOC101738302_[Bombyx_mori]
5841	O_BomoMG19893_complete:A_BomoMG_comp40661_c1_seq6 411bp	Bomo_Chr25		GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005840 C ribosome GO:0006412 P translation GO:0030529 C ribonucleoprotein complex
5842	O_BomoMG19894_complete:A_BomoMG_comp40661_c1_seq7 356bp	Bomo_Scaf015		GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005840 C ribosome GO:0006412 P translation GO:0030529 C ribonucleoprotein complex
5843	O_BomoMG19896_internal:A_BomoMG_comp40661_c2_seq1 140bp	Bomo_Chr25		GO:0000836 C Hrd1p ubiquitin ligase complex GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0018279 P protein N-linked glycosylation via asparagine GO:0030433 P ubiquitin-dependent ERAD pathway GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
5844	O_BomoMG19897_complete:A_BomoMG_comp40662_c0_seq1 232bp	Bomo_Chr5
5845	O_BomoMG19898_complete:A_BomoMG_comp40662_c0_seq1 149bp	Bomo_Chr5		GO:0003676 F nucleic acid binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0008270 F zinc ion binding GO:0046872 F metal ion binding
5846	O_BomoMG19899_complete:A_BomoMG_comp40662_c0_seq1 141bp	Bomo_Chr5
5847	O_BomoMG198_internal:A_BomoMG_comp17438_c0_seq1 362bp	Bomo_Chr21	PREDICTED:_microtubule-associated_protein_futsch_[Amyelois_transitella]
5848	O_BomoMG19902_complete:A_BomoMG_comp40662_c0_seq1 120bp	Bomo_Chr5
5849	O_BomoMG19906_complete:A_BomoMG_comp40662_c0_seq2 346bp	Bomo_Chr5		GO:0003676 F nucleic acid binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0008270 F zinc ion binding GO:0046872 F metal ion binding
5850	O_BomoMG19907_complete:A_BomoMG_comp40662_c0_seq2 232bp	Bomo_Chr5