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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5761 O_BomoMG19784_complete:A_BomoMG_comp40649_c1_seq20
372bp
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
5762 O_BomoMG19785_complete:A_BomoMG_comp40649_c1_seq21
193bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5763 O_BomoMG19787_5prime_partial:A_BomoMG_comp40649_c1_seq22
162bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5764 O_BomoMG19788_complete:A_BomoMG_comp40649_c1_seq23
103bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5765 O_BomoMG19789_complete:A_BomoMG_comp40649_c1_seq24
462bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5766 O_BomoMG1978_3prime_partial:A_BomoMG_comp21115_c1_seq1
185bp
 nimrod_B_precursor_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007368 P determination of left/right symmetry
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0035108 P limb morphogenesis
GO:0042074 P cell migration involved in gastrulation
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0055113 P epiboly involved in gastrulation with mouth forming second
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0060976 P coronary vasculature development
GO:0061371 P determination of heart left/right asymmetry
GO:0070062 C extracellular exosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097094 P craniofacial suture morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
5767 O_BomoMG19790_5prime_partial:A_BomoMG_comp40649_c1_seq25
293bp
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
5768 O_BomoMG19791_complete:A_BomoMG_comp40649_c1_seq25
210bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5769 O_BomoMG19795_complete:A_BomoMG_comp40649_c1_seq26
193bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5770 O_BomoMG19796_complete:A_BomoMG_comp40649_c1_seq27
210bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5771 O_BomoMG19798_complete:A_BomoMG_comp40649_c1_seq28
344bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5772 O_BomoMG1979_5prime_partial:A_BomoMG_comp21116_c0_seq1
316bp
 PREDICTED:_DNA-directed_RNA_polymerase,_mitochondrial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
5773 O_BomoMG197_3prime_partial:A_BomoMG_comp17435_c0_seq1
330bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
5774 O_BomoMG19800_complete:A_BomoMG_comp40649_c1_seq29
327bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5775 O_BomoMG19801_5prime_partial:A_BomoMG_comp40649_c1_seq29
248bp
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
5776 O_BomoMG19804_5prime_partial:A_BomoMG_comp40649_c1_seq30
248bp
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
5777 O_BomoMG19805_complete:A_BomoMG_comp40649_c1_seq30
193bp
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
5778 O_BomoMG19809_internal:A_BomoMG_comp40651_c0_seq1
728bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
5779 O_BomoMG19810_internal:A_BomoMG_comp40651_c0_seq3
777bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
5780 O_BomoMG19811_5prime_partial:A_BomoMG_comp40652_c0_seq1
147bp
GO:0006810 P transport
GO:0015604 F ABC-type phosphonate transporter activity
GO:0015716 P organic phosphonate transport
GO:0042597 C periplasmic space
GO:0042916 P organic phosphonate transport
GO:0042917 F ABC-type phosphonate transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
5781 O_BomoMG19812_complete:A_BomoMG_comp40652_c0_seq2
113bp
5782 O_BomoMG19813_5prime_partial:A_BomoMG_comp40652_c0_seq3
199bp
GO:0006810 P transport
GO:0015604 F ABC-type phosphonate transporter activity
GO:0015716 P organic phosphonate transport
GO:0042597 C periplasmic space
GO:0042916 P organic phosphonate transport
GO:0042917 F ABC-type phosphonate transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
5783 O_BomoMG19814_complete:A_BomoMG_comp40652_c0_seq7
113bp
5784 O_BomoMG19815_complete:A_BomoMG_comp40652_c0_seq11
113bp
5785 O_BomoMG19818_complete:A_BomoMG_comp40653_c0_seq5
107bp
5786 O_BomoMG19819_complete:A_BomoMG_comp40653_c0_seq7
107bp
5787 O_BomoMG1981_internal:A_BomoMG_comp21116_c1_seq1
243bp
 PREDICTED:_DNA-directed_RNA_polymerase,_mitochondrial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
5788 O_BomoMG19821_complete:A_BomoMG_comp40654_c0_seq3
231bp
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
5789 O_BomoMG19823_complete:A_BomoMG_comp40654_c0_seq5
230bp
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
5790 O_BomoMG19824_complete:A_BomoMG_comp40654_c0_seq6
229bp
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1990738 F pseudouridine 5'-phosphatase activity
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