SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
571 O_BomoMG10881_complete:A_BomoMG_comp38475_c0_seq8
111bp
 PREDICTED:_uncharacterized_protein_LOC105841746_isoform_X4_[Bombyx_mori]
572 O_BomoMG10882_3prime_partial:A_BomoMG_comp38476_c0_seq1
127bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
573 O_BomoMG10883_complete:A_BomoMG_comp38476_c0_seq2
460bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
574 O_BomoMG10884_3prime_partial:A_BomoMG_comp38476_c0_seq2
188bp
 PREDICTED:_non-lysosomal_glucosylceramidase-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
575 O_BomoMG10885_3prime_partial:A_BomoMG_comp38477_c0_seq1
377bp
 PREDICTED:_rabenosyn-5_[Papilio_xuthus]
GO:0000011 P vacuole inheritance
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0006896 P Golgi to vacuole transport
GO:0006897 P endocytosis
GO:0010009 C cytoplasmic side of endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0031901 C early endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
576 O_BomoMG10886_complete:A_BomoMG_comp38480_c0_seq1
334bp
 PREDICTED:_glutamate--cysteine_ligase_regulatory_subunit_[Papilio_polytes]
GO:0004357 F glutamate-cysteine ligase activity
GO:0006534 P cysteine metabolic process
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006979 P response to oxidative stress
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0008637 P apoptotic mitochondrial changes
GO:0014823 P response to activity
GO:0017109 C glutamate-cysteine ligase complex
GO:0030234 F enzyme regulator activity
GO:0035226 F glutamate-cysteine ligase catalytic subunit binding
GO:0035229 P positive regulation of glutamate-cysteine ligase activity
GO:0035729 P cellular response to hepatocyte growth factor stimulus
GO:0035733 P hepatic stellate cell activation
GO:0042493 P response to xenobiotic stimulus
GO:0043524 P negative regulation of neuron apoptotic process
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0044752 P response to human chorionic gonadotropin
GO:0046982 F protein heterodimerization activity
GO:0050880 P blood vessel diameter maintenance
GO:0051409 P response to nitrosative stress
GO:0051900 P regulation of mitochondrial depolarization
GO:0071333 P cellular response to glucose stimulus
GO:0071372 P cellular response to follicle-stimulating hormone stimulus
GO:0097069 P cellular response to thyroxine stimulus
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
577 O_BomoMG10887_internal:A_BomoMG_comp38481_c0_seq1
191bp
 PREDICTED:_glycerol-3-phosphate_acyltransferase_1,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008374 F O-acyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0044255 P cellular lipid metabolic process
578 O_BomoMG10888_internal:A_BomoMG_comp38481_c0_seq2
177bp
 PREDICTED:_glycerol-3-phosphate_acyltransferase_1,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008374 F O-acyltransferase activity
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0044255 P cellular lipid metabolic process
579 O_BomoMG10889_5prime_partial:A_BomoMG_comp38482_c1_seq2
194bp
 PREDICTED:_integral_membrane_protein_GPR155_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
580 O_BomoMG1088_complete:A_BomoMG_comp19809_c0_seq2
152bp
 PREDICTED:_rRNA-processing_protein_UTP23_homolog_[Amyelois_transitella]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0070181 F small ribosomal subunit rRNA binding
581 O_BomoMG10891_5prime_partial:A_BomoMG_comp38485_c0_seq1
134bp
 peroxisomal_membrane_anchor_protein_[Bombyx_mori]
582 O_BomoMG10892_complete:A_BomoMG_comp38485_c0_seq2
248bp
 peroxisomal_membrane_anchor_protein_[Bombyx_mori]
GO:0003714 F transcription corepressor activity
GO:0005102 F signaling receptor binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0016560 P protein import into peroxisome matrix, docking
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0032091 P negative regulation of protein binding
GO:0034453 P microtubule anchoring
GO:0036250 P peroxisome transport along microtubule
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044721 P protein import into peroxisome matrix, substrate release
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0048487 F beta-tubulin binding
GO:0051260 P protein homooligomerization
GO:1901094 P negative regulation of protein homotetramerization
583 O_BomoMG10893_complete:A_BomoMG_comp38487_c0_seq1
715bp
 PREDICTED:_putative_ATP-dependent_RNA_helicase_Pl10_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006413 P translational initiation
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0036464 C cytoplasmic ribonucleoprotein granule
584 O_BomoMG10894_complete:A_BomoMG_comp38487_c0_seq1
132bp
 PREDICTED:_sn1-specific_diacylglycerol_lipase_beta-like_isoform_X2_[Halyomorpha_halys]
585 O_BomoMG10896_3prime_partial:A_BomoMG_comp38488_c1_seq1
230bp
 calcineurin_A_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030431 P sleep
GO:0033192 F calmodulin-dependent protein phosphatase activity
GO:0046872 F metal ion binding
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
586 O_BomoMG10897_5prime_partial:A_BomoMG_comp38488_c1_seq2
274bp
 calcineurin_A_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030431 P sleep
GO:0033192 F calmodulin-dependent protein phosphatase activity
GO:0046872 F metal ion binding
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
587 O_BomoMG10898_5prime_partial:A_BomoMG_comp38489_c1_seq1
605bp
 PREDICTED:_gastrulation_defective_protein_1_homolog_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0022008 P neurogenesis
588 O_BomoMG1089_3prime_partial:A_BomoMG_comp19811_c0_seq1
538bp
 PREDICTED:_uncharacterized_protein_LOC101742265_isoform_X2_[Bombyx_mori]
589 O_BomoMG10901_internal:A_BomoMG_comp38490_c0_seq1
982bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
590 O_BomoMG10902_internal:A_BomoMG_comp38490_c0_seq2
137bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
591 O_BomoMG10903_complete:A_BomoMG_comp38492_c0_seq1
539bp
 cytochrome_P450_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006697 P ecdysone biosynthetic process
GO:0007298 P border follicle cell migration
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017143 P insecticide metabolic process
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035302 F ecdysteroid 25-hydroxylase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045456 P ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0055114 P obsolete oxidation-reduction process
592 O_BomoMG10904_5prime_partial:A_BomoMG_comp38494_c0_seq1
286bp
 Pleckstrin-like_proteiny_domain-containing_family_J_member_1_[Operophtera_brumata]
593 O_BomoMG10907_3prime_partial:A_BomoMG_comp38495_c0_seq2
201bp
 PREDICTED:_viral_IAP-associated_factor_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0043281 P regulation of cysteine-type endopeptidase activity involved in apoptotic process
594 O_BomoMG10908_complete:A_BomoMG_comp38496_c0_seq1
188bp
 PREDICTED:_uncharacterized_protein_LOC106111152_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006259 P DNA metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0008852 F exodeoxyribonuclease I activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
595 O_BomoMG10909_3prime_partial:A_BomoMG_comp38496_c0_seq2
148bp
 PREDICTED:_uncharacterized_protein_LOC106114748_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006259 P DNA metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0008852 F exodeoxyribonuclease I activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
596 O_BomoMG10910_3prime_partial:A_BomoMG_comp38497_c0_seq1
328bp
 Uncharacterized_protein_OBRU01_16851_[Operophtera_brumata]
597 O_BomoMG10912_complete:A_BomoMG_comp38498_c0_seq1
199bp
 PREDICTED:_guanine_nucleotide-binding_protein-like_3_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001652 C granular component
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0009267 P cellular response to starvation
GO:0016887 F ATP hydrolysis activity
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0042273 P ribosomal large subunit biogenesis
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0090307 P mitotic spindle assembly
598 O_BomoMG10913_3prime_partial:A_BomoMG_comp38498_c0_seq2
312bp
 PREDICTED:_guanine_nucleotide-binding_protein-like_3_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001652 C granular component
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0009267 P cellular response to starvation
GO:0016887 F ATP hydrolysis activity
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0042273 P ribosomal large subunit biogenesis
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0090307 P mitotic spindle assembly
599 O_BomoMG10914_complete:A_BomoMG_comp38498_c0_seq3
507bp
 PREDICTED:_guanine_nucleotide-binding_protein-like_3_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001652 C granular component
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0009267 P cellular response to starvation
GO:0016887 F ATP hydrolysis activity
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0042273 P ribosomal large subunit biogenesis
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0090307 P mitotic spindle assembly
600 O_BomoMG10915_complete:A_BomoMG_comp38499_c0_seq2
234bp
 PREDICTED:_6-phosphogluconolactonase_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0009051 P pentose-phosphate shunt, oxidative branch
GO:0016787 F hydrolase activity
GO:0017057 F 6-phosphogluconolactonase activity
GO:0048029 F monosaccharide binding
previous next from show/16985

- SilkBase 1999-2023 -