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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5611 O_BomoMG19443_internal:A_BomoMG_comp40613_c1_seq2
270bp
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
5612 O_BomoMG19444_complete:A_BomoMG_comp40613_c1_seq3
423bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
5613 O_BomoMG19445_complete:A_BomoMG_comp40613_c1_seq4
423bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
5614 O_BomoMG19447_5prime_partial:A_BomoMG_comp40613_c1_seq5
238bp
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
5615 O_BomoMG19448_5prime_partial:A_BomoMG_comp40613_c2_seq1
330bp
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
5616 O_BomoMG19449_complete:A_BomoMG_comp40613_c3_seq1
1047bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042393 F histone binding
GO:0045087 P innate immune response
5617 O_BomoMG1944_5prime_partial:A_BomoMG_comp21043_c1_seq1
222bp
 PREDICTED:_WD_repeat-containing_protein_91_[Papilio_polytes]
5618 O_BomoMG19451_3prime_partial:A_BomoMG_comp40613_c6_seq2
223bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0007623 P circadian rhythm
GO:0008284 P positive regulation of cell population proliferation
GO:0008286 P insulin receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0008361 P regulation of cell size
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009986 C cell surface
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019915 P lipid storage
GO:0030307 P positive regulation of cell growth
GO:0031104 P dendrite regeneration
GO:0035091 F phosphatidylinositol binding
GO:0035206 P regulation of hemocyte proliferation
GO:0035264 P multicellular organism growth
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042306 P regulation of protein import into nucleus
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046620 P regulation of organ growth
GO:0046622 P positive regulation of organ growth
GO:0048477 P oogenesis
GO:0048680 P positive regulation of axon regeneration
GO:0050773 P regulation of dendrite development
GO:0060292 P long-term synaptic depression
GO:0090278 P negative regulation of peptide hormone secretion
GO:1901215 P negative regulation of neuron death
5619 O_BomoMG19453_5prime_partial:A_BomoMG_comp40613_c6_seq7
273bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0007623 P circadian rhythm
GO:0008284 P positive regulation of cell population proliferation
GO:0008286 P insulin receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0008361 P regulation of cell size
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009986 C cell surface
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019915 P lipid storage
GO:0030307 P positive regulation of cell growth
GO:0031104 P dendrite regeneration
GO:0035091 F phosphatidylinositol binding
GO:0035206 P regulation of hemocyte proliferation
GO:0035264 P multicellular organism growth
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042306 P regulation of protein import into nucleus
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046620 P regulation of organ growth
GO:0046622 P positive regulation of organ growth
GO:0048477 P oogenesis
GO:0048680 P positive regulation of axon regeneration
GO:0050773 P regulation of dendrite development
GO:0060292 P long-term synaptic depression
GO:0090278 P negative regulation of peptide hormone secretion
GO:1901215 P negative regulation of neuron death
5620 O_BomoMG19454_complete:A_BomoMG_comp40613_c14_seq1
487bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
5621 O_BomoMG19456_5prime_partial:A_BomoMG_comp40615_c0_seq1
739bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
5622 O_BomoMG1945_5prime_partial:A_BomoMG_comp21044_c0_seq1
108bp
 Histone_deacetylase_4,_partial_[Papilio_xuthus]
5623 O_BomoMG19461_internal:A_BomoMG_comp40615_c1_seq1
346bp
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
5624 O_BomoMG19462_3prime_partial:A_BomoMG_comp40616_c1_seq3
386bp
GO:0003756 F protein disulfide isomerase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
GO:0009100 P glycoprotein metabolic process
GO:0009986 C cell surface
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
GO:0070062 C extracellular exosome
5625 O_BomoMG19463_complete:A_BomoMG_comp40617_c0_seq2
186bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
5626 O_BomoMG19464_5prime_partial:A_BomoMG_comp40617_c0_seq3
165bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
5627 O_BomoMG19465_5prime_partial:A_BomoMG_comp40617_c0_seq4
409bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
5628 O_BomoMG19466_complete:A_BomoMG_comp40617_c0_seq5
368bp
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0048681 P negative regulation of axon regeneration
GO:0050291 F sphingosine N-acyltransferase activity
GO:1900148 P negative regulation of Schwann cell migration
GO:1905045 P negative regulation of Schwann cell proliferation involved in axon regeneration
5629 O_BomoMG19468_3prime_partial:A_BomoMG_comp40619_c1_seq1
838bp
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5630 O_BomoMG19469_3prime_partial:A_BomoMG_comp40619_c1_seq3
1307bp
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5631 O_BomoMG19472_complete:A_BomoMG_comp40620_c1_seq1
411bp
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5632 O_BomoMG19475_complete:A_BomoMG_comp40620_c1_seq2
411bp
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5633 O_BomoMG19478_internal:A_BomoMG_comp40620_c2_seq1
320bp
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
5634 O_BomoMG19480_5prime_partial:A_BomoMG_comp40620_c2_seq2
185bp
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
5635 O_BomoMG19483_complete:A_BomoMG_comp40624_c0_seq1
609bp
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006959 P humoral immune response
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
5636 O_BomoMG19487_complete:A_BomoMG_comp40624_c0_seq6
652bp
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006959 P humoral immune response
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
5637 O_BomoMG1948_internal:A_BomoMG_comp21044_c0_seq2
162bp
 Histone_deacetylase_4,_partial_[Papilio_xuthus]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001570 P vasculogenesis
GO:0003682 F chromatin binding
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006954 P inflammatory response
GO:0007043 P cell-cell junction assembly
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0030182 P neuron differentiation
GO:0030183 P B cell differentiation
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032703 P negative regulation of interleukin-2 production
GO:0033613 F DNA-binding transcription factor binding
GO:0042113 P B cell activation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045843 P negative regulation of striated muscle tissue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051402 P neuron apoptotic process
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
GO:0071260 P cellular response to mechanical stimulus
GO:0071889 F 14-3-3 protein binding
GO:0090050 P positive regulation of cell migration involved in sprouting angiogenesis
GO:1901215 P negative regulation of neuron death
GO:1901223 P negative regulation of NIK/NF-kappaB signaling
5638 O_BomoMG19491_complete:A_BomoMG_comp40625_c0_seq1
787bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
5639 O_BomoMG19492_complete:A_BomoMG_comp40625_c0_seq1
320bp
5640 O_BomoMG19498_complete:A_BomoMG_comp40625_c0_seq2
1055bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001654 P eye development
GO:0001934 P positive regulation of protein phosphorylation
GO:0003714 F transcription corepressor activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007224 P smoothened signaling pathway
GO:0007628 P adult walking behavior
GO:0008284 P positive regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0009952 P anterior/posterior pattern specification
GO:0010842 P retina layer formation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019048 P modulation by virus of host process
GO:0030182 P neuron differentiation
GO:0030218 P erythrocyte differentiation
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030578 P PML body organization
GO:0032092 P positive regulation of protein binding
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043388 P positive regulation of DNA binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045766 P positive regulation of angiogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046330 P positive regulation of JNK cascade
GO:0046332 F SMAD binding
GO:0046790 F virion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051726 P regulation of cell cycle
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0060235 P lens induction in camera-type eye
GO:0060395 P SMAD protein signal transduction
GO:0061072 P iris morphogenesis
GO:0071456 P cellular response to hypoxia
GO:0090575 C RNA polymerase II transcription regulator complex
GO:0097193 P intrinsic apoptotic signaling pathway
GO:1901796 P regulation of signal transduction by p53 class mediator
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