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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5461 O_BomoMG19228_internal:A_BomoMG_comp40580_c0_seq1
510bp
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0044822 F RNA binding
GO:0045087 P innate immune response
5462 O_BomoMG19229_5prime_partial:A_BomoMG_comp40580_c0_seq1
425bp
5463 O_BomoMG1922_internal:A_BomoMG_comp20992_c0_seq1
260bp
 UDP-glycosyltransferase_UGT48C1_precursor_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
5464 O_BomoMG19232_internal:A_BomoMG_comp40580_c0_seq2
266bp
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
5465 O_BomoMG19234_3prime_partial:A_BomoMG_comp40580_c0_seq3
265bp
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0019233 P sensory perception of pain
GO:0019730 P antimicrobial humoral response
GO:0043066 P negative regulation of apoptotic process
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051298 P centrosome duplication
5466 O_BomoMG19238_5prime_partial:A_BomoMG_comp40581_c0_seq1
765bp
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
5467 O_BomoMG19240_internal:A_BomoMG_comp40581_c0_seq2
471bp
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
5468 O_BomoMG19242_internal:A_BomoMG_comp40582_c1_seq1
353bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5469 O_BomoMG19243_3prime_partial:A_BomoMG_comp40582_c1_seq2
322bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5470 O_BomoMG19244_complete:A_BomoMG_comp40582_c1_seq3
345bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5471 O_BomoMG19246_complete:A_BomoMG_comp40582_c1_seq5
323bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5472 O_BomoMG19248_5prime_partial:A_BomoMG_comp40582_c1_seq6
376bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5473 O_BomoMG1924_complete:A_BomoMG_comp21000_c0_seq1
183bp
 PREDICTED:_NEDD8-conjugating_enzyme_UBE2F-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006301 P postreplication repair
GO:0016874 F ligase activity
GO:0019788 F NEDD8 transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0045116 P protein neddylation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
5474 O_BomoMG19250_3prime_partial:A_BomoMG_comp40582_c1_seq7
300bp
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
5475 O_BomoMG19251_complete:A_BomoMG_comp40583_c1_seq1
199bp
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5476 O_BomoMG19252_complete:A_BomoMG_comp40583_c1_seq2
1219bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
5477 O_BomoMG19254_complete:A_BomoMG_comp40583_c1_seq3
709bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5478 O_BomoMG19255_complete:A_BomoMG_comp40583_c1_seq3
474bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
5479 O_BomoMG19258_internal:A_BomoMG_comp40584_c0_seq2
368bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5480 O_BomoMG19259_5prime_partial:A_BomoMG_comp40584_c0_seq3
754bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5481 O_BomoMG1925_5prime_partial:A_BomoMG_comp21006_c0_seq1
129bp
 PREDICTED:_zinc_finger_protein_62-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019827 P stem cell population maintenance
GO:0021915 P neural tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0046872 F metal ion binding
5482 O_BomoMG19260_5prime_partial:A_BomoMG_comp40584_c0_seq4
678bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5483 O_BomoMG19261_5prime_partial:A_BomoMG_comp40584_c0_seq5
754bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5484 O_BomoMG19262_5prime_partial:A_BomoMG_comp40584_c0_seq6
797bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5485 O_BomoMG19263_5prime_partial:A_BomoMG_comp40584_c0_seq7
797bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5486 O_BomoMG19264_5prime_partial:A_BomoMG_comp40584_c0_seq8
678bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
5487 O_BomoMG19265_internal:A_BomoMG_comp40585_c0_seq1
188bp
GO:0005794 C Golgi apparatus
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0072661 P protein localization to plasma membrane
5488 O_BomoMG19266_5prime_partial:A_BomoMG_comp40585_c1_seq1
606bp
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016032 P viral process
GO:0030137 C COPI-coated vesicle
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050690 P regulation of defense response to virus by virus
GO:0072661 P protein localization to plasma membrane
5489 O_BomoMG19269_complete:A_BomoMG_comp40585_c1_seq2
401bp
GO:0000045 P autophagosome assembly
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006915 P apoptotic process
GO:0016032 P viral process
GO:0034497 P protein localization to phagophore assembly site
GO:0044325 F transmembrane transporter binding
GO:0072661 P protein localization to plasma membrane
5490 O_BomoMG1926_5prime_partial:A_BomoMG_comp21006_c0_seq2
240bp
 PREDICTED:_zinc_finger_protein_62-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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