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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomoMG10789_complete:A_BomoMG_comp38420_c0_seq3
537bp
 PREDICTED:_uncharacterized_protein_LOC106132394_isoform_X2_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0008150 P biological_process
512 O_BomoMG1078_5prime_partial:A_BomoMG_comp19803_c0_seq1
374bp
 PREDICTED:_nucleoporin_Nup43_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0051028 P mRNA transport
GO:0051301 P cell division
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
513 O_BomoMG10790_complete:A_BomoMG_comp38420_c0_seq4
355bp
 PREDICTED:_uncharacterized_protein_LOC106132394_isoform_X2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0071564 C npBAF complex
514 O_BomoMG10791_complete:A_BomoMG_comp38420_c0_seq4
130bp
 PREDICTED:_histone-lysine_N-methyltransferase_2D-like_isoform_X3_[Amyelois_transitella]
515 O_BomoMG10792_5prime_partial:A_BomoMG_comp38422_c0_seq1
203bp
 PREDICTED:_rho_GTPase-activating_protein_21_isoform_X2_[Bombyx_mori]
516 O_BomoMG10794_complete:A_BomoMG_comp38423_c0_seq1
252bp
 PREDICTED:_protein_SCO1_homolog,_mitochondrial_[Amyelois_transitella]
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0008535 P respiratory chain complex IV assembly
GO:0030016 C myofibril
GO:0046872 F metal ion binding
GO:0072492 C host cell mitochondrial intermembrane space
517 O_BomoMG10795_internal:A_BomoMG_comp38424_c0_seq1
151bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
518 O_BomoMG10797_complete:A_BomoMG_comp38426_c0_seq1
174bp
 PREDICTED:_FUN14_domain-containing_protein_1_[Amyelois_transitella]
GO:0000422 P autophagy of mitochondrion
GO:0001666 P response to hypoxia
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031307 C integral component of mitochondrial outer membrane
519 O_BomoMG10798_complete:A_BomoMG_comp38426_c0_seq4
140bp
 PREDICTED:_FUN14_domain-containing_protein_1A_isoform_X2_[Papilio_machaon]
GO:0000422 P autophagy of mitochondrion
GO:0001666 P response to hypoxia
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031307 C integral component of mitochondrial outer membrane
520 O_BomoMG1079_internal:A_BomoMG_comp19804_c0_seq1
136bp
 PREDICTED:_protein_deltex_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008270 F zinc ion binding
GO:0008593 P regulation of Notch signaling pathway
GO:0016055 P Wnt signaling pathway
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0035220 P wing disc development
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
521 O_BomoMG107_internal:A_BomoMG_comp17193_c0_seq1
142bp
 PREDICTED:_uncharacterized_protein_LOC106142941_[Amyelois_transitella]
522 O_BomoMG10802_5prime_partial:A_BomoMG_comp38435_c0_seq1
154bp
 PREDICTED:_SAGA-associated_factor_29_homolog_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0019899 F enzyme binding
GO:0035064 F methylated histone binding
GO:0043966 P histone H3 acetylation
GO:0047485 F protein N-terminus binding
GO:0070461 C SAGA-type complex
GO:0071169 P establishment of protein localization to chromatin
523 O_BomoMG10803_5prime_partial:A_BomoMG_comp38438_c0_seq1
189bp
 PREDICTED:_phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0007399 P nervous system development
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0010975 P regulation of neuron projection development
GO:0016311 P dephosphorylation
GO:0016314 F phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030165 F PDZ domain binding
GO:0030336 P negative regulation of cell migration
GO:0031647 P regulation of protein stability
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043491 P protein kinase B signaling
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0051800 F phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051898 P negative regulation of protein kinase B signaling
524 O_BomoMG10805_5prime_partial:A_BomoMG_comp38438_c0_seq3
201bp
 PREDICTED:_phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0007399 P nervous system development
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0010975 P regulation of neuron projection development
GO:0016311 P dephosphorylation
GO:0016314 F phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030165 F PDZ domain binding
GO:0030336 P negative regulation of cell migration
GO:0031647 P regulation of protein stability
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043491 P protein kinase B signaling
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0051800 F phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051898 P negative regulation of protein kinase B signaling
525 O_BomoMG10807_5prime_partial:A_BomoMG_comp38440_c1_seq1
174bp
 PREDICTED:_zinc_finger_protein_665-like_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
526 O_BomoMG10808_complete:A_BomoMG_comp38441_c0_seq1
693bp
 PREDICTED:_cirhin_[Amyelois_transitella]
GO:0001650 C fibrillar center
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0034455 C t-UTP complex
GO:0044822 F RNA binding
527 O_BomoMG10809_5prime_partial:A_BomoMG_comp38441_c0_seq2
116bp
 PREDICTED:_cirhin-like_[Plutella_xylostella]
528 O_BomoMG10810_complete:A_BomoMG_comp38441_c0_seq3
580bp
 PREDICTED:_cirhin_[Amyelois_transitella]
GO:0001650 C fibrillar center
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0034455 C t-UTP complex
GO:0044822 F RNA binding
529 O_BomoMG10811_internal:A_BomoMG_comp38443_c0_seq1
220bp
 PREDICTED:_mannose-6-phosphate_isomerase_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0004476 F mannose-6-phosphate isomerase activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:0061611 P mannose to fructose-6-phosphate metabolic process
GO:0070062 C extracellular exosome
530 O_BomoMG10812_5prime_partial:A_BomoMG_comp38443_c0_seq2
321bp
 PREDICTED:_mannose-6-phosphate_isomerase_[Amyelois_transitella]
GO:0004476 F mannose-6-phosphate isomerase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008270 F zinc ion binding
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
531 O_BomoMG10813_3prime_partial:A_BomoMG_comp38446_c0_seq1
116bp
 PREDICTED:_uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0042555 C MCM complex
GO:0051301 P cell division
532 O_BomoMG10814_5prime_partial:A_BomoMG_comp38446_c1_seq1
494bp
 PREDICTED:_uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0042555 C MCM complex
GO:0051301 P cell division
533 O_BomoMG10816_5prime_partial:A_BomoMG_comp38446_c1_seq2
301bp
 PREDICTED:_uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0042555 C MCM complex
GO:0051301 P cell division
534 O_BomoMG10817_complete:A_BomoMG_comp38446_c1_seq2
180bp
 PREDICTED:_uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0042555 C MCM complex
GO:0051301 P cell division
535 O_BomoMG10819_complete:A_BomoMG_comp38448_c0_seq1
549bp
 hypothetical_protein_KGM_20642_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000784 C chromosome, telomeric region
GO:0000993 F RNA polymerase II complex binding
GO:0001711 P endodermal cell fate commitment
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006378 P mRNA polyadenylation
GO:0007049 P cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0010390 P histone monoubiquitination
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0019827 P stem cell population maintenance
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031442 P positive regulation of mRNA 3'-end processing
GO:0031648 P protein destabilization
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0033523 P histone H2B ubiquitination
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048147 P negative regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0071222 P cellular response to lipopolysaccharide
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
536 O_BomoMG10820_complete:A_BomoMG_comp38449_c0_seq1
259bp
 PREDICTED:_AP-2_complex_subunit_mu_[Bombyx_mori]
GO:0005048 F signal sequence binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030131 C clathrin adaptor complex
GO:0030133 C transport vesicle
GO:0043195 C terminal bouton
GO:0044325 F transmembrane transporter binding
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0070062 C extracellular exosome
GO:1903077 P negative regulation of protein localization to plasma membrane
537 O_BomoMG10824_complete:A_BomoMG_comp38449_c0_seq1
109bp
 PREDICTED:_AP-2_complex_subunit_mu_[Dufourea_novaeangliae]
GO:0005048 F signal sequence binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030131 C clathrin adaptor complex
GO:0044325 F transmembrane transporter binding
GO:0070062 C extracellular exosome
GO:1903077 P negative regulation of protein localization to plasma membrane
538 O_BomoMG10825_complete:A_BomoMG_comp38450_c0_seq1
552bp
 PREDICTED:_endonuclease/exonuclease/phosphatase_family_domain-containing_protein_1-like_[Papilio_machaon]
GO:0003677 F DNA binding
GO:0006281 P DNA repair
539 O_BomoMG10828_internal:A_BomoMG_comp38454_c1_seq1
111bp
 Zinc_finger_protein_[Operophtera_brumata]
540 O_BomoMG10829_complete:A_BomoMG_comp38457_c0_seq1
308bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
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