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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4591 O_BomoMG17703_5prime_partial:A_BomoMG_comp40350_c0_seq1
445bp
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0031396 P regulation of protein ubiquitination
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
4592 O_BomoMG17704_complete:A_BomoMG_comp40350_c0_seq2
215bp
4593 O_BomoMG17705_5prime_partial:A_BomoMG_comp40350_c0_seq2
190bp
4594 O_BomoMG17706_complete:A_BomoMG_comp40350_c0_seq3
595bp
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0031396 P regulation of protein ubiquitination
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
4595 O_BomoMG17707_complete:A_BomoMG_comp40350_c0_seq4
340bp
4596 O_BomoMG17708_complete:A_BomoMG_comp40350_c0_seq4
215bp
4597 O_BomoMG17709_complete:A_BomoMG_comp40351_c0_seq1
674bp
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0072372 C cilium
4598 O_BomoMG1770_internal:A_BomoMG_comp20751_c0_seq1
514bp
 PREDICTED:_bromodomain_and_WD_repeat-containing_protein_1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
4599 O_BomoMG17712_3prime_partial:A_BomoMG_comp40352_c0_seq1
770bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4600 O_BomoMG17715_3prime_partial:A_BomoMG_comp40352_c0_seq2
634bp
4601 O_BomoMG17719_internal:A_BomoMG_comp40352_c0_seq3
112bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4602 O_BomoMG17720_complete:A_BomoMG_comp40353_c0_seq1
1033bp
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0035145 C exon-exon junction complex
GO:0035195 P gene silencing by miRNA
GO:0046872 F metal ion binding
GO:0071456 P cellular response to hypoxia
GO:2000624 P positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
4603 O_BomoMG17723_5prime_partial:A_BomoMG_comp40354_c0_seq1
203bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016032 P viral process
GO:0032403 F protein-containing complex binding
GO:0051260 P protein homooligomerization
4604 O_BomoMG17724_5prime_partial:A_BomoMG_comp40354_c1_seq1
468bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007472 P wing disc morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0046777 P protein autophosphorylation
GO:0051301 P cell division
GO:0090303 P positive regulation of wound healing
4605 O_BomoMG17726_internal:A_BomoMG_comp40354_c1_seq2
184bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007472 P wing disc morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0046777 P protein autophosphorylation
GO:0051301 P cell division
GO:0090303 P positive regulation of wound healing
4606 O_BomoMG17727_internal:A_BomoMG_comp40354_c1_seq3
352bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007472 P wing disc morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0046777 P protein autophosphorylation
GO:0051301 P cell division
GO:0090303 P positive regulation of wound healing
4607 O_BomoMG17728_internal:A_BomoMG_comp40354_c1_seq4
276bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007472 P wing disc morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0046777 P protein autophosphorylation
GO:0051301 P cell division
GO:0090303 P positive regulation of wound healing
4608 O_BomoMG17729_internal:A_BomoMG_comp40355_c0_seq1
345bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4609 O_BomoMG17732_5prime_partial:A_BomoMG_comp40356_c0_seq1
856bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045787 P positive regulation of cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
4610 O_BomoMG17733_5prime_partial:A_BomoMG_comp40356_c0_seq2
563bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0016568 P chromatin organization
GO:0043025 C neuronal cell body
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0071339 C MLL1 complex
4611 O_BomoMG17734_complete:A_BomoMG_comp40357_c0_seq1
567bp
4612 O_BomoMG17735_internal:A_BomoMG_comp40357_c0_seq2
175bp
4613 O_BomoMG17736_internal:A_BomoMG_comp40357_c0_seq3
242bp
4614 O_BomoMG17737_3prime_partial:A_BomoMG_comp40357_c1_seq1
188bp
4615 O_BomoMG17738_3prime_partial:A_BomoMG_comp40357_c1_seq2
188bp
4616 O_BomoMG17739_complete:A_BomoMG_comp40358_c0_seq1
120bp
4617 O_BomoMG17740_5prime_partial:A_BomoMG_comp40358_c0_seq3
1425bp
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
4618 O_BomoMG17743_internal:A_BomoMG_comp40358_c0_seq6
1063bp
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
4619 O_BomoMG17746_5prime_partial:A_BomoMG_comp40358_c0_seq7
1339bp
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
4620 O_BomoMG17749_internal:A_BomoMG_comp40358_c0_seq9
1394bp
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0000902 P cell morphogenesis
GO:0001824 P blastocyst development
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010793 P regulation of mRNA export from nucleus
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017145 P stem cell division
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
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