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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4111 O_BomoMG16814_complete:A_BomoMG_comp40217_c0_seq7
511bp
GO:0001669 C acrosomal vesicle
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
4112 O_BomoMG16816_complete:A_BomoMG_comp40217_c0_seq8
405bp
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008152 P metabolic process
GO:0010165 P response to X-ray
GO:0010212 P response to ionizing radiation
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0050829 P defense response to Gram-negative bacterium
GO:0055114 P obsolete oxidation-reduction process
GO:2000377 P regulation of reactive oxygen species metabolic process
4113 O_BomoMG16818_complete:A_BomoMG_comp40217_c0_seq9
365bp
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008152 P metabolic process
GO:0010165 P response to X-ray
GO:0010212 P response to ionizing radiation
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0050829 P defense response to Gram-negative bacterium
GO:0055114 P obsolete oxidation-reduction process
GO:2000377 P regulation of reactive oxygen species metabolic process
4114 O_BomoMG1681_complete:A_BomoMG_comp20595_c0_seq1
469bp
 translation_initiation_factor_2_gamma_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0006412 P translation
GO:0006413 P translational initiation
4115 O_BomoMG16822_complete:A_BomoMG_comp40217_c0_seq12
201bp
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008152 P metabolic process
GO:0010165 P response to X-ray
GO:0010212 P response to ionizing radiation
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0050829 P defense response to Gram-negative bacterium
GO:0055114 P obsolete oxidation-reduction process
GO:2000377 P regulation of reactive oxygen species metabolic process
4116 O_BomoMG16823_complete:A_BomoMG_comp40219_c0_seq4
339bp
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000800 C lateral element
GO:0001932 P regulation of protein phosphorylation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006259 P DNA metabolic process
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006281 P DNA repair
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008022 F protein C-terminus binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0010833 P telomere maintenance via telomere lengthening
GO:0016605 C PML body
GO:0031297 P replication fork processing
GO:0032200 P telomere organization
GO:0035861 C site of double-strand break
GO:0042148 P strand invasion
GO:0042802 F identical protein binding
GO:0043142 F single-stranded DNA helicase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051106 P positive regulation of DNA ligation
GO:0051260 P protein homooligomerization
GO:0070182 F DNA polymerase binding
GO:0070192 P chromosome organization involved in meiotic cell cycle
GO:0071312 P cellular response to alkaloid
GO:0071479 P cellular response to ionizing radiation
GO:0072711 P cellular response to hydroxyurea
GO:0072757 P cellular response to camptothecin
GO:1990414 P replication-born double-strand break repair via sister chromatid exchange
GO:1990426 P mitotic recombination-dependent replication fork processing
4117 O_BomoMG16824_5prime_partial:A_BomoMG_comp40221_c0_seq1
1238bp
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
4118 O_BomoMG16827_5prime_partial:A_BomoMG_comp40221_c0_seq2
1233bp
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
4119 O_BomoMG1682_5prime_partial:A_BomoMG_comp20604_c0_seq1
178bp
 PREDICTED:_unc-112-related_protein-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0048738 P cardiac muscle tissue development
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
4120 O_BomoMG16830_internal:A_BomoMG_comp40221_c1_seq1
407bp
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
4121 O_BomoMG16831_5prime_partial:A_BomoMG_comp40223_c0_seq1
620bp
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4122 O_BomoMG16833_complete:A_BomoMG_comp40223_c0_seq2
531bp
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007417 P central nervous system development
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0017005 F 3'-tyrosyl-DNA phosphodiesterase activity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4123 O_BomoMG16835_internal:A_BomoMG_comp40224_c0_seq1
123bp
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
4124 O_BomoMG16837_internal:A_BomoMG_comp40224_c0_seq2
136bp
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
4125 O_BomoMG16838_internal:A_BomoMG_comp40224_c0_seq3
694bp
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
4126 O_BomoMG16839_5prime_partial:A_BomoMG_comp40224_c0_seq3
370bp
4127 O_BomoMG1683_complete:A_BomoMG_comp20609_c0_seq1
335bp
 PREDICTED:_protein_farnesyltransferase/geranylgeranyltransferase_type-1_subunit_alpha_[Bombyx_mori]
GO:0004659 F prenyltransferase activity
GO:0004660 F protein farnesyltransferase activity
GO:0004661 F protein geranylgeranyltransferase activity
GO:0004662 F CAAX-protein geranylgeranyltransferase activity
GO:0005953 C CAAX-protein geranylgeranyltransferase complex
GO:0005965 C protein farnesyltransferase complex
GO:0008318 F protein prenyltransferase activity
GO:0016740 F transferase activity
GO:0018342 P protein prenylation
GO:0018343 P protein farnesylation
GO:0018344 P protein geranylgeranylation
4128 O_BomoMG16843_5prime_partial:A_BomoMG_comp40226_c0_seq1
144bp
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
4129 O_BomoMG16844_5prime_partial:A_BomoMG_comp40228_c0_seq1
321bp
4130 O_BomoMG16845_internal:A_BomoMG_comp40228_c0_seq2
543bp
4131 O_BomoMG16849_5prime_partial:A_BomoMG_comp40230_c1_seq1
483bp
GO:0004177 F aminopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1903955 P positive regulation of protein targeting to mitochondrion
4132 O_BomoMG1684_complete:A_BomoMG_comp20611_c0_seq1
385bp
 mitochondrial_ribosomal_protein_S5_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
4133 O_BomoMG16850_complete:A_BomoMG_comp40230_c2_seq1
274bp
GO:0004177 F aminopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1903955 P positive regulation of protein targeting to mitochondrion
4134 O_BomoMG16851_5prime_partial:A_BomoMG_comp40230_c2_seq2
959bp
GO:0000209 P protein polyubiquitination
GO:0004177 F aminopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1903955 P positive regulation of protein targeting to mitochondrion
4135 O_BomoMG16852_5prime_partial:A_BomoMG_comp40231_c0_seq1
124bp
GO:0002432 P granuloma formation
GO:0002467 P germinal center formation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006887 P exocytosis
GO:0006909 P phagocytosis
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0033093 C Weibel-Palade body
GO:0043304 P regulation of mast cell degranulation
GO:0043320 P natural killer cell degranulation
GO:0045921 P positive regulation of exocytosis
GO:0051607 P defense response to virus
GO:0055037 C recycling endosome
GO:0070382 C exocytic vesicle
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1903307 P positive regulation of regulated secretory pathway
4136 O_BomoMG16854_internal:A_BomoMG_comp40231_c0_seq2
901bp
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007269 P neurotransmitter secretion
GO:0008022 F protein C-terminus binding
GO:0098793 C presynapse
4137 O_BomoMG16856_internal:A_BomoMG_comp40231_c0_seq3
876bp
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007269 P neurotransmitter secretion
GO:0008022 F protein C-terminus binding
GO:0098793 C presynapse
4138 O_BomoMG16860_complete:A_BomoMG_comp40233_c0_seq1
562bp
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
4139 O_BomoMG16861_3prime_partial:A_BomoMG_comp40234_c0_seq1
769bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4140 O_BomoMG16864_5prime_partial:A_BomoMG_comp40234_c0_seq2
347bp
GO:0003674 F molecular_function
GO:0006665 P sphingolipid metabolic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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