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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3781 O_BomoMG16215_5prime_partial:A_BomoMG_comp40113_c0_seq2
101bp
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007596 P blood coagulation
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
3782 O_BomoMG16216_3prime_partial:A_BomoMG_comp40113_c1_seq1
320bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
3783 O_BomoMG16217_5prime_partial:A_BomoMG_comp40114_c0_seq2
259bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
3784 O_BomoMG16218_3prime_partial:A_BomoMG_comp40114_c0_seq2
184bp
3785 O_BomoMG16221_3prime_partial:A_BomoMG_comp40114_c0_seq3
184bp
3786 O_BomoMG16224_internal:A_BomoMG_comp40114_c0_seq5
376bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
3787 O_BomoMG16227_internal:A_BomoMG_comp40114_c0_seq6
355bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
3788 O_BomoMG16230_5prime_partial:A_BomoMG_comp40114_c0_seq7
259bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
3789 O_BomoMG16231_3prime_partial:A_BomoMG_comp40114_c0_seq7
163bp
3790 O_BomoMG16235_3prime_partial:A_BomoMG_comp40114_c0_seq9
163bp
3791 O_BomoMG16237_complete:A_BomoMG_comp40115_c1_seq1
705bp
GO:0001894 P tissue homeostasis
GO:0004860 F protein kinase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006469 P negative regulation of protein kinase activity
GO:0008039 P synaptic target recognition
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019221 P cytokine-mediated signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0060438 P trachea development
GO:2000647 P negative regulation of stem cell proliferation
3792 O_BomoMG16239_3prime_partial:A_BomoMG_comp40117_c0_seq1
1145bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
3793 O_BomoMG16242_3prime_partial:A_BomoMG_comp40117_c0_seq2
1154bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
3794 O_BomoMG16247_3prime_partial:A_BomoMG_comp40117_c0_seq5
1154bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
3795 O_BomoMG1624_complete:A_BomoMG_comp20530_c0_seq1
320bp
 receptor_for_activated_protein_kinase_C_RACK_1_isoform_1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005080 F protein kinase C binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0007626 P locomotory behavior
GO:0009267 P cellular response to starvation
GO:0016243 P regulation of autophagosome size
GO:0018991 P oviposition
GO:0035220 P wing disc development
GO:0042335 P cuticle development
GO:0044829 P positive regulation by host of viral genome replication
GO:0045725 P positive regulation of glycogen biosynthetic process
GO:0046716 P muscle cell cellular homeostasis
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0075522 P IRES-dependent viral translational initiation
3796 O_BomoMG16250_3prime_partial:A_BomoMG_comp40117_c0_seq6
1145bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
3797 O_BomoMG16253_complete:A_BomoMG_comp40118_c0_seq1
264bp
GO:0000062 F fatty-acyl-CoA binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3798 O_BomoMG16255_complete:A_BomoMG_comp40119_c0_seq1
1308bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3799 O_BomoMG16257_complete:A_BomoMG_comp40119_c0_seq2
1308bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3800 O_BomoMG16259_complete:A_BomoMG_comp40119_c0_seq3
1092bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3801 O_BomoMG1625_complete:A_BomoMG_comp20532_c0_seq1
206bp
 vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768 C endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
3802 O_BomoMG16260_complete:A_BomoMG_comp40119_c0_seq6
1092bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3803 O_BomoMG16261_3prime_partial:A_BomoMG_comp40120_c1_seq1
252bp
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
3804 O_BomoMG16262_complete:A_BomoMG_comp40121_c1_seq1
110bp
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
3805 O_BomoMG16263_internal:A_BomoMG_comp40122_c1_seq1
183bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3806 O_BomoMG16264_5prime_partial:A_BomoMG_comp40122_c1_seq3
166bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3807 O_BomoMG16265_5prime_partial:A_BomoMG_comp40123_c1_seq1
653bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007275 P multicellular organism development
3808 O_BomoMG16269_complete:A_BomoMG_comp40124_c0_seq3
245bp
GO:0002230 P positive regulation of defense response to virus by host
GO:0004733 F pyridoxamine-phosphate oxidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008615 P pyridoxine biosynthetic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016638 F oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0042823 P pyridoxal phosphate biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
3809 O_BomoMG1626_complete:A_BomoMG_comp20532_c0_seq2
206bp
 vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768 C endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
3810 O_BomoMG16270_complete:A_BomoMG_comp40124_c0_seq5
258bp
GO:0002230 P positive regulation of defense response to virus by host
GO:0004733 F pyridoxamine-phosphate oxidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008615 P pyridoxine biosynthetic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016638 F oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0042823 P pyridoxal phosphate biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
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