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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3631 O_BomoMG15967_complete:A_BomoMG_comp40057_c0_seq28
155bp
3632 O_BomoMG1596_3prime_partial:A_BomoMG_comp20491_c0_seq1
307bp
 PREDICTED:_neural_Wiskott-Aldrich_syndrome_protein-like_[Bombyx_mori]
GO:0002625 P regulation of T cell antigen processing and presentation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006461 P protein-containing complex assembly
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0008154 P actin polymerization or depolymerization
GO:0008544 P epidermis development
GO:0012506 C vesicle membrane
GO:0015629 C actin cytoskeleton
GO:0016197 P endosomal transport
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030041 P actin filament polymerization
GO:0030048 P actin filament-based movement
GO:0030695 F GTPase regulator activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042110 P T cell activation
GO:0042802 F identical protein binding
GO:0043274 F phospholipase binding
GO:0050790 P regulation of catalytic activity
GO:0050852 P T cell receptor signaling pathway
GO:0070062 C extracellular exosome
GO:2000146 P negative regulation of cell motility
GO:2000601 P positive regulation of Arp2/3 complex-mediated actin nucleation
3633 O_BomoMG15970_complete:A_BomoMG_comp40057_c0_seq29
301bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0016607 C nuclear speck
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035062 C omega speckle
GO:0035327 C euchromatin
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
3634 O_BomoMG15971_complete:A_BomoMG_comp40057_c0_seq29
155bp
3635 O_BomoMG15975_complete:A_BomoMG_comp40057_c0_seq30
155bp
3636 O_BomoMG15978_complete:A_BomoMG_comp40057_c0_seq31
155bp
3637 O_BomoMG15980_complete:A_BomoMG_comp40057_c0_seq31
112bp
3638 O_BomoMG15981_complete:A_BomoMG_comp40057_c0_seq32
370bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0016607 C nuclear speck
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035062 C omega speckle
GO:0035327 C euchromatin
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
3639 O_BomoMG15982_complete:A_BomoMG_comp40057_c0_seq32
155bp
3640 O_BomoMG15984_complete:A_BomoMG_comp40058_c0_seq2
138bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3641 O_BomoMG15986_complete:A_BomoMG_comp40058_c0_seq4
245bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3642 O_BomoMG15988_complete:A_BomoMG_comp40058_c0_seq5
195bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3643 O_BomoMG1598_3prime_partial:A_BomoMG_comp20491_c0_seq2
290bp
 PREDICTED:_neural_Wiskott-Aldrich_syndrome_protein-like_[Bombyx_mori]
GO:0002625 P regulation of T cell antigen processing and presentation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006461 P protein-containing complex assembly
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0008154 P actin polymerization or depolymerization
GO:0008544 P epidermis development
GO:0012506 C vesicle membrane
GO:0015629 C actin cytoskeleton
GO:0016197 P endosomal transport
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030041 P actin filament polymerization
GO:0030048 P actin filament-based movement
GO:0030695 F GTPase regulator activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042110 P T cell activation
GO:0042802 F identical protein binding
GO:0043274 F phospholipase binding
GO:0050790 P regulation of catalytic activity
GO:0050852 P T cell receptor signaling pathway
GO:0070062 C extracellular exosome
GO:2000146 P negative regulation of cell motility
GO:2000601 P positive regulation of Arp2/3 complex-mediated actin nucleation
3644 O_BomoMG15990_5prime_partial:A_BomoMG_comp40059_c0_seq1
360bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0045892 P negative regulation of transcription, DNA-templated
3645 O_BomoMG15991_3prime_partial:A_BomoMG_comp40059_c0_seq2
356bp
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030666 C endocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0050999 P regulation of nitric-oxide synthase activity
3646 O_BomoMG15992_complete:A_BomoMG_comp40060_c0_seq1
488bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
3647 O_BomoMG15993_3prime_partial:A_BomoMG_comp40061_c0_seq3
841bp
3648 O_BomoMG15994_complete:A_BomoMG_comp40061_c0_seq3
320bp
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3649 O_BomoMG15995_complete:A_BomoMG_comp40061_c0_seq4
424bp
GO:0005634 C nucleus
GO:0046872 F metal ion binding
3650 O_BomoMG15997_complete:A_BomoMG_comp40061_c0_seq4
101bp
3651 O_BomoMG15998_5prime_partial:A_BomoMG_comp40062_c0_seq1
492bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3652 O_BomoMG159_internal:A_BomoMG_comp17359_c0_seq1
111bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF46.1-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001666 P response to hypoxia
GO:0001822 P kidney development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007576 P nucleolar fragmentation
GO:0046872 F metal ion binding
GO:0051593 P response to folic acid
3653 O_BomoMG15_internal:A_BomoMG_comp16897_c0_seq2
270bp
 PREDICTED:_Williams-Beuren_syndrome_chromosomal_region_16_protein-like_[Amyelois_transitella]
GO:0005087 F guanyl-nucleotide exchange factor activity
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0043547 P positive regulation of GTPase activity
GO:0044822 F RNA binding
3654 O_BomoMG16001_5prime_partial:A_BomoMG_comp40063_c0_seq1
203bp
GO:0000139 C Golgi membrane
GO:0001843 P neural tube closure
GO:0002093 P auditory receptor cell morphogenesis
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003151 P outflow tract morphogenesis
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021747 P cochlear nucleus development
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0035909 P aorta morphogenesis
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060425 P lung morphogenesis
GO:0060463 P lung lobe morphogenesis
GO:0060982 P coronary artery morphogenesis
GO:0061156 P pulmonary artery morphogenesis
GO:0072358 P circulatory system development
GO:0090178 P regulation of establishment of planar polarity involved in neural tube closure
GO:1901301 P regulation of cargo loading into COPII-coated vesicle
3655 O_BomoMG16004_5prime_partial:A_BomoMG_comp40063_c0_seq2
203bp
GO:0000139 C Golgi membrane
GO:0001843 P neural tube closure
GO:0002093 P auditory receptor cell morphogenesis
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003151 P outflow tract morphogenesis
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0021747 P cochlear nucleus development
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0035909 P aorta morphogenesis
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060425 P lung morphogenesis
GO:0060463 P lung lobe morphogenesis
GO:0060982 P coronary artery morphogenesis
GO:0061156 P pulmonary artery morphogenesis
GO:0072358 P circulatory system development
GO:0090178 P regulation of establishment of planar polarity involved in neural tube closure
GO:1901301 P regulation of cargo loading into COPII-coated vesicle
3656 O_BomoMG16006_internal:A_BomoMG_comp40064_c0_seq1
488bp
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0001680 P tRNA 3'-terminal CCA addition
GO:0003723 F RNA binding
GO:0004810 F tRNA adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0009022 F tRNA nucleotidyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042780 P tRNA 3'-end processing
GO:0052927 F CTP:tRNA cytidylyltransferase activity
GO:0052928 F CTP:3'-cytidine-tRNA cytidylyltransferase activity
GO:0052929 F ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
3657 O_BomoMG16007_3prime_partial:A_BomoMG_comp40064_c1_seq3
252bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0009838 P abscission
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032466 P negative regulation of cytokinesis
GO:0046872 F metal ion binding
GO:0051301 P cell division
3658 O_BomoMG16009_5prime_partial:A_BomoMG_comp40065_c0_seq2
130bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3659 O_BomoMG1600_internal:A_BomoMG_comp20492_c0_seq1
261bp
 PREDICTED:_rab_GTPase-binding_effector_protein_1_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0008083 F growth factor activity
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030139 C endocytic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
3660 O_BomoMG16010_3prime_partial:A_BomoMG_comp40065_c1_seq1
132bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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