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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
361 O_BomoMG10563_complete:A_BomoMG_comp38276_c0_seq1
181bp
 splicing_factor_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
362 O_BomoMG10564_complete:A_BomoMG_comp38276_c0_seq2
393bp
 splicing_factor_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
363 O_BomoMG10565_internal:A_BomoMG_comp38277_c0_seq1
1194bp
 PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007411 P axon guidance
GO:0008091 C spectrin
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032403 F protein-containing complex binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
364 O_BomoMG10572_3prime_partial:A_BomoMG_comp38284_c0_seq1
348bp
 PREDICTED:_pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
365 O_BomoMG10573_internal:A_BomoMG_comp38284_c0_seq2
351bp
 PREDICTED:_pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
366 O_BomoMG10574_3prime_partial:A_BomoMG_comp38285_c0_seq1
120bp
 PREDICTED:_uncharacterized_protein_LOC105841658_isoform_X2_[Bombyx_mori]
367 O_BomoMG10575_internal:A_BomoMG_comp38288_c1_seq1
388bp
 PREDICTED:_protein_SMG8_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0045859 P regulation of protein kinase activity
368 O_BomoMG10577_5prime_partial:A_BomoMG_comp38289_c0_seq1
163bp
 PREDICTED:_uncharacterized_protein_LOC106129013_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
369 O_BomoMG10578_internal:A_BomoMG_comp38289_c0_seq2
340bp
 PREDICTED:_uncharacterized_protein_LOC106129013_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
370 O_BomoMG10579_5prime_partial:A_BomoMG_comp38289_c1_seq1
597bp
 Uncharacterized_protein_OBRU01_13245_[Operophtera_brumata]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
371 O_BomoMG10580_3prime_partial:A_BomoMG_comp38290_c0_seq2
196bp
 PREDICTED:_LIM_domain_only_protein_3-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
372 O_BomoMG10581_3prime_partial:A_BomoMG_comp38290_c0_seq3
196bp
 PREDICTED:_LIM_domain_only_protein_3-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
373 O_BomoMG10582_3prime_partial:A_BomoMG_comp38290_c0_seq4
204bp
 PREDICTED:_LIM_domain_only_protein_3-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
374 O_BomoMG10583_3prime_partial:A_BomoMG_comp38290_c0_seq6
204bp
 PREDICTED:_LIM_domain_only_protein_3-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
375 O_BomoMG10584_internal:A_BomoMG_comp38292_c0_seq2
261bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
376 O_BomoMG10586_internal:A_BomoMG_comp38293_c0_seq1
447bp
 PREDICTED:_G_patch_domain-containing_protein_1_homolog_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
377 O_BomoMG10587_internal:A_BomoMG_comp38293_c1_seq1
221bp
 PREDICTED:_G_patch_domain-containing_protein_1_homolog_[Papilio_machaon]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
378 O_BomoMG10589_5prime_partial:A_BomoMG_comp38293_c2_seq1
171bp
 PREDICTED:_G_patch_domain-containing_protein_1_homolog_[Amyelois_transitella]
379 O_BomoMG1058_complete:A_BomoMG_comp19769_c0_seq1
226bp
 PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_Tim21_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0031966 C mitochondrial membrane
380 O_BomoMG10590_complete:A_BomoMG_comp38294_c0_seq1
119bp
 PREDICTED:_28S_ribosomal_protein_S33,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
381 O_BomoMG10591_complete:A_BomoMG_comp38295_c0_seq1
541bp
 PREDICTED:_sphingosine-1-phosphate_lyase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0007275 P multicellular organism development
GO:0007527 P adult somatic muscle development
GO:0008117 F sphinganine-1-phosphate aldolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030149 P sphingolipid catabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0046331 P lateral inhibition
382 O_BomoMG10594_3prime_partial:A_BomoMG_comp38296_c0_seq1
209bp
 PREDICTED:_DNA_replication_licensing_factor_MCM4_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007052 P mitotic spindle organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
383 O_BomoMG10595_3prime_partial:A_BomoMG_comp38296_c0_seq3
209bp
 PREDICTED:_DNA_replication_licensing_factor_MCM4_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007052 P mitotic spindle organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
384 O_BomoMG10596_complete:A_BomoMG_comp38297_c0_seq1
383bp
 PREDICTED:_TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
385 O_BomoMG10598_complete:A_BomoMG_comp38297_c0_seq2
389bp
 PREDICTED:_TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
386 O_BomoMG1059_complete:A_BomoMG_comp19770_c0_seq1
122bp
 hypothetical_protein_M422DRAFT_161958_[Sphaerobolus_stellatus_SS14]
387 O_BomoMG105_internal:A_BomoMG_comp17185_c0_seq1
137bp
 hypothetical_protein_XA68_2822_[Ophiocordyceps_unilateralis]
388 O_BomoMG10600_complete:A_BomoMG_comp38297_c0_seq3
349bp
 TIA1_cytotoxic_granule-associated_RNA_binding_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
389 O_BomoMG10601_complete:A_BomoMG_comp38297_c0_seq4
403bp
 TIA-1_homologue_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
390 O_BomoMG10603_complete:A_BomoMG_comp38297_c0_seq5
397bp
 PREDICTED:_TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
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