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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3241 O_BomoMG15282_complete:A_BomoMG_comp39936_c1_seq1
522bp
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3242 O_BomoMG15283_5prime_partial:A_BomoMG_comp39936_c1_seq2
532bp
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3243 O_BomoMG15284_internal:A_BomoMG_comp39937_c0_seq1
763bp
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
3244 O_BomoMG15285_internal:A_BomoMG_comp39937_c0_seq2
767bp
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
3245 O_BomoMG15286_internal:A_BomoMG_comp39937_c0_seq3
190bp
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
3246 O_BomoMG15288_3prime_partial:A_BomoMG_comp39937_c0_seq4
586bp
GO:0000790 C chromatin
GO:0000993 F RNA polymerase II complex binding
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0009411 P response to UV
GO:0016055 P Wnt signaling pathway
GO:0019899 F enzyme binding
GO:0030308 P negative regulation of cell growth
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0042752 P regulation of circadian rhythm
GO:0043065 P positive regulation of apoptotic process
GO:0043086 P negative regulation of catalytic activity
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0044609 C DBIRD complex
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0090311 P regulation of protein deacetylation
GO:1900034 P regulation of cellular response to heat
GO:1902230 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000003 P positive regulation of DNA damage checkpoint
3247 O_BomoMG15290_3prime_partial:A_BomoMG_comp39937_c0_seq5
590bp
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007049 P cell cycle
GO:0048471 C perinuclear region of cytoplasm
3248 O_BomoMG15292_3prime_partial:A_BomoMG_comp39937_c0_seq6
249bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
3249 O_BomoMG15293_complete:A_BomoMG_comp39938_c0_seq1
351bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
3250 O_BomoMG15295_complete:A_BomoMG_comp39938_c0_seq2
458bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
3251 O_BomoMG15297_complete:A_BomoMG_comp39938_c0_seq3
462bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
3252 O_BomoMG15299_complete:A_BomoMG_comp39939_c0_seq3
201bp
GO:0003674 F molecular_function
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005761 C mitochondrial ribosome
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
3253 O_BomoMG1529_complete:A_BomoMG_comp20362_c0_seq1
357bp
 syntaxin_5A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0000902 P cell morphogenesis
GO:0005484 F SNAP receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006878 P cellular copper ion homeostasis
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006906 P vesicle fusion
GO:0006909 P phagocytosis
GO:0007030 P Golgi organization
GO:0007112 P male meiosis cytokinesis
GO:0007269 P neurotransmitter secretion
GO:0007283 P spermatogenesis
GO:0008283 P cell population proliferation
GO:0009306 P protein secretion
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045930 P negative regulation of mitotic cell cycle
GO:0048278 P vesicle docking
GO:0055070 P copper ion homeostasis
GO:0060305 P regulation of cell diameter
GO:0098793 C presynapse
3254 O_BomoMG152_5prime_partial:A_BomoMG_comp17346_c0_seq2
293bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3255 O_BomoMG15300_3prime_partial:A_BomoMG_comp39940_c0_seq1
142bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3256 O_BomoMG15301_5prime_partial:A_BomoMG_comp39940_c1_seq1
1164bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3257 O_BomoMG15302_internal:A_BomoMG_comp39940_c1_seq2
685bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3258 O_BomoMG15304_internal:A_BomoMG_comp39940_c1_seq3
678bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3259 O_BomoMG15306_5prime_partial:A_BomoMG_comp39940_c1_seq4
1157bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3260 O_BomoMG15307_complete:A_BomoMG_comp39941_c0_seq1
274bp
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
3261 O_BomoMG15309_complete:A_BomoMG_comp39941_c0_seq2
274bp
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
3262 O_BomoMG1530_complete:A_BomoMG_comp20368_c0_seq1
243bp
 PREDICTED:_protein_canopy_homolog_1_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0007275 P multicellular organism development
3263 O_BomoMG15310_complete:A_BomoMG_comp39941_c0_seq3
285bp
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
3264 O_BomoMG15311_complete:A_BomoMG_comp39941_c0_seq4
285bp
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
3265 O_BomoMG15313_internal:A_BomoMG_comp39942_c0_seq2
234bp
3266 O_BomoMG15314_3prime_partial:A_BomoMG_comp39942_c0_seq2
122bp
3267 O_BomoMG15315_3prime_partial:A_BomoMG_comp39942_c0_seq3
627bp
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
3268 O_BomoMG15317_complete:A_BomoMG_comp39943_c0_seq1
274bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0040008 P regulation of growth
3269 O_BomoMG15318_complete:A_BomoMG_comp39943_c1_seq2
292bp
GO:0001501 P skeletal system development
GO:0001654 P eye development
GO:0002102 C podosome
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0007507 P heart development
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0022617 P extracellular matrix disassembly
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042169 F SH2 domain binding
GO:0042995 C cell projection
GO:0045600 P positive regulation of fat cell differentiation
GO:0060348 P bone development
GO:0060612 P adipose tissue development
GO:0070273 F phosphatidylinositol-4-phosphate binding
GO:0071800 P podosome assembly
GO:0072657 P protein localization to membrane
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
3270 O_BomoMG15319_complete:A_BomoMG_comp39943_c1_seq3
342bp
GO:0001501 P skeletal system development
GO:0001654 P eye development
GO:0002102 C podosome
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0007507 P heart development
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0022617 P extracellular matrix disassembly
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042169 F SH2 domain binding
GO:0042995 C cell projection
GO:0045600 P positive regulation of fat cell differentiation
GO:0060348 P bone development
GO:0060612 P adipose tissue development
GO:0070273 F phosphatidylinositol-4-phosphate binding
GO:0071800 P podosome assembly
GO:0072657 P protein localization to membrane
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
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