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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
301 O_BomoMG10466_complete:A_BomoMG_comp38209_c0_seq1
109bp
302 O_BomoMG10468_internal:A_BomoMG_comp38213_c1_seq1
101bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
303 O_BomoMG10469_internal:A_BomoMG_comp38215_c0_seq1
164bp
 PREDICTED:_uncharacterized_protein_LOC101743794_[Bombyx_mori]
304 O_BomoMG10470_internal:A_BomoMG_comp38215_c0_seq2
116bp
 PREDICTED:_uncharacterized_protein_LOC101743794_[Bombyx_mori]
305 O_BomoMG10473_5prime_partial:A_BomoMG_comp38215_c1_seq1
117bp
 PREDICTED:_uncharacterized_protein_LOC101743794_[Bombyx_mori]
306 O_BomoMG10475_5prime_partial:A_BomoMG_comp38216_c0_seq1
225bp
 cuticular_protein_RR-1_motif_34_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
307 O_BomoMG10476_complete:A_BomoMG_comp38218_c0_seq1
335bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
308 O_BomoMG10478_3prime_partial:A_BomoMG_comp38218_c0_seq1
104bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
309 O_BomoMG10479_3prime_partial:A_BomoMG_comp38218_c0_seq2
416bp
 PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006606 P protein import into nucleus
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0030162 P regulation of proteolysis
GO:0035172 P hemocyte proliferation
GO:0035556 P intracellular signal transduction
GO:0045087 P innate immune response
GO:0046777 P protein autophosphorylation
GO:0048262 P determination of dorsal/ventral asymmetry
310 O_BomoMG10481_complete:A_BomoMG_comp38219_c0_seq1
514bp
 PREDICTED:_myoneurin-like_[Papilio_polytes]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
311 O_BomoMG10482_5prime_partial:A_BomoMG_comp38222_c0_seq1
584bp
 PREDICTED:_uncharacterized_protein_LOC106129437_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0031396 P regulation of protein ubiquitination
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
312 O_BomoMG10484_complete:A_BomoMG_comp38222_c1_seq1
324bp
 Death_domain-associated_protein_6_[Operophtera_brumata]
313 O_BomoMG10485_3prime_partial:A_BomoMG_comp38222_c1_seq1
135bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105386126_[Plutella_xylostella]
314 O_BomoMG10486_5prime_partial:A_BomoMG_comp38225_c0_seq1
284bp
 PREDICTED:_zinc_finger_protein_501-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019827 P stem cell population maintenance
GO:0021915 P neural tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0046872 F metal ion binding
315 O_BomoMG10488_3prime_partial:A_BomoMG_comp38225_c0_seq1
257bp
 PREDICTED:_transcription_factor_E4F1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019827 P stem cell population maintenance
GO:0021915 P neural tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0046872 F metal ion binding
316 O_BomoMG10489_complete:A_BomoMG_comp38227_c0_seq1
294bp
 PREDICTED:_solute_carrier_family_25_member_38-B-like_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005215 F transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006783 P heme biosynthetic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030218 P erythrocyte differentiation
317 O_BomoMG1048_internal:A_BomoMG_comp19761_c0_seq1
271bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
318 O_BomoMG10490_5prime_partial:A_BomoMG_comp38227_c0_seq4
293bp
 PREDICTED:_solute_carrier_family_25_member_38-B-like_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005215 F transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006783 P heme biosynthetic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030218 P erythrocyte differentiation
319 O_BomoMG10491_internal:A_BomoMG_comp38228_c0_seq3
110bp
 PREDICTED:_insecticyanin-A-like_[Amyelois_transitella]
GO:0000302 P response to reactive oxygen species
GO:0001525 P angiogenesis
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0070062 C extracellular exosome
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
320 O_BomoMG10492_complete:A_BomoMG_comp38229_c1_seq1
321bp
 PREDICTED:_sideroflexin-1_isoform_X1_[Papilio_polytes]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006826 P iron ion transport
GO:0015075 F ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030218 P erythrocyte differentiation
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
321 O_BomoMG10494_internal:A_BomoMG_comp38232_c0_seq1
102bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_rpc2_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
322 O_BomoMG10495_internal:A_BomoMG_comp38232_c1_seq1
144bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC2_[Papilio_machaon]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
323 O_BomoMG10496_internal:A_BomoMG_comp38232_c2_seq1
254bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_rpc2_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
324 O_BomoMG10498_complete:A_BomoMG_comp38235_c0_seq1
408bp
 PREDICTED:_putative_neutral_sphingomyelinase_isoform_X1_[Bombyx_mori]
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
325 O_BomoMG10499_complete:A_BomoMG_comp38236_c0_seq1
474bp
 PREDICTED:_fasciclin-3_isoform_X3_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005102 F signaling receptor binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007611 P learning or memory
GO:0008039 P synaptic target recognition
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016200 P synaptic target attraction
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0031594 C neuromuscular junction
GO:0031965 C nuclear membrane
GO:0042803 F protein homodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0055037 C recycling endosome
326 O_BomoMG10501_internal:A_BomoMG_comp38237_c0_seq1
421bp
 PREDICTED:_talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
327 O_BomoMG10506_complete:A_BomoMG_comp38243_c0_seq1
349bp
 PREDICTED:_torsin-like_protein_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0016887 F ATP hydrolysis activity
GO:0040011 P locomotion
GO:0042053 P regulation of dopamine metabolic process
GO:0043104 P positive regulation of GTP cyclohydrolase I activity
GO:0048085 P adult chitin-containing cuticle pigmentation
GO:0051085 P chaperone cofactor-dependent protein refolding
GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
328 O_BomoMG10507_3prime_partial:A_BomoMG_comp38244_c0_seq1
175bp
 hypothetical_protein_KGM_18080_[Danaus_plexippus]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0033962 P P-body assembly
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061014 P positive regulation of mRNA catabolic process
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
329 O_BomoMG10508_complete:A_BomoMG_comp38244_c0_seq2
289bp
 hypothetical_protein_KGM_18080_[Danaus_plexippus]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0033962 P P-body assembly
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061014 P positive regulation of mRNA catabolic process
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
330 O_BomoMG10509_complete:A_BomoMG_comp38246_c0_seq1
256bp
 PREDICTED:_acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
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