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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2491 O_BomoMG13969_3prime_partial:A_BomoMG_comp39597_c0_seq2
292bp
GO:0000813 C ESCRT I complex
GO:0001558 P regulation of cell growth
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016197 P endosomal transport
GO:0019058 P viral life cycle
GO:0030154 P cell differentiation
GO:0030216 P keratinocyte differentiation
GO:0030374 F nuclear receptor coactivator activity
GO:0031625 F ubiquitin protein ligase binding
GO:0031902 C late endosome membrane
GO:0036258 P multivesicular body assembly
GO:0039702 P viral budding via host ESCRT complex
GO:0040008 P regulation of growth
GO:0042803 F protein homodimerization activity
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043405 P regulation of MAP kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046755 P viral budding
GO:0046790 F virion binding
GO:0048306 F calcium-dependent protein binding
GO:0048524 P positive regulation of viral process
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0075733 P intracellular transport of virus
GO:0097352 P autophagosome maturation
GO:1902186 P obsolete regulation of viral release from host cell
GO:1902188 P obsolete positive regulation of viral release from host cell
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
GO:1903772 P regulation of viral budding via host ESCRT complex
GO:1903774 P positive regulation of viral budding via host ESCRT complex
GO:2000397 P positive regulation of ubiquitin-dependent endocytosis
2492 O_BomoMG1396_complete:A_BomoMG_comp20232_c0_seq1
482bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2493 O_BomoMG13970_5prime_partial:A_BomoMG_comp39599_c1_seq1
219bp
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
2494 O_BomoMG13972_internal:A_BomoMG_comp39599_c1_seq3
138bp
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
2495 O_BomoMG13973_internal:A_BomoMG_comp39599_c1_seq4
157bp
2496 O_BomoMG13975_5prime_partial:A_BomoMG_comp39600_c0_seq2
203bp
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
2497 O_BomoMG13976_complete:A_BomoMG_comp39601_c0_seq1
482bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
2498 O_BomoMG1397_complete:A_BomoMG_comp20232_c0_seq2
482bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2499 O_BomoMG13980_complete:A_BomoMG_comp39601_c0_seq2
198bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
2500 O_BomoMG13984_3prime_partial:A_BomoMG_comp39605_c0_seq1
213bp
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0006829 P zinc ion transport
GO:0006886 P intracellular protein transport
GO:0007596 P blood coagulation
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019882 P antigen processing and presentation
GO:0019903 F protein phosphatase binding
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0048007 P antigen processing and presentation, exogenous lipid antigen via MHC class Ib
GO:0048490 P anterograde synaptic vesicle transport
GO:0051138 P positive regulation of NK T cell differentiation
GO:1904115 C axon cytoplasm
2501 O_BomoMG13987_3prime_partial:A_BomoMG_comp39605_c0_seq2
213bp
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
2502 O_BomoMG1398_5prime_partial:A_BomoMG_comp20233_c0_seq1
292bp
 chitin_deacetylase_5b_[Helicoverpa_armigera]
2503 O_BomoMG13990_internal:A_BomoMG_comp39605_c0_seq3
397bp
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0006829 P zinc ion transport
GO:0006886 P intracellular protein transport
GO:0007596 P blood coagulation
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019882 P antigen processing and presentation
GO:0019903 F protein phosphatase binding
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0048007 P antigen processing and presentation, exogenous lipid antigen via MHC class Ib
GO:0048490 P anterograde synaptic vesicle transport
GO:0051138 P positive regulation of NK T cell differentiation
GO:1904115 C axon cytoplasm
2504 O_BomoMG13994_internal:A_BomoMG_comp39605_c0_seq4
397bp
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0006829 P zinc ion transport
GO:0006886 P intracellular protein transport
GO:0007596 P blood coagulation
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019882 P antigen processing and presentation
GO:0019903 F protein phosphatase binding
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0048007 P antigen processing and presentation, exogenous lipid antigen via MHC class Ib
GO:0048490 P anterograde synaptic vesicle transport
GO:0051138 P positive regulation of NK T cell differentiation
GO:1904115 C axon cytoplasm
2505 O_BomoMG13998_internal:A_BomoMG_comp39608_c0_seq1
336bp
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005794 C Golgi apparatus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
2506 O_BomoMG139_internal:A_BomoMG_comp17309_c0_seq1
108bp
 PREDICTED:_uncharacterized_protein_LOC101737722_[Bombyx_mori]
2507 O_BomoMG14003_complete:A_BomoMG_comp39609_c1_seq1
158bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0050690 P regulation of defense response to virus by virus
2508 O_BomoMG14004_complete:A_BomoMG_comp39609_c1_seq2
153bp
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008542 P visual learning
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0036465 P synaptic vesicle recycling
GO:0043231 C intracellular membrane-bounded organelle
GO:0045444 P fat cell differentiation
GO:0050885 P neuromuscular process controlling balance
GO:0060612 P adipose tissue development
GO:0098793 C presynapse
2509 O_BomoMG14005_complete:A_BomoMG_comp39609_c1_seq3
158bp
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008542 P visual learning
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0036465 P synaptic vesicle recycling
GO:0043231 C intracellular membrane-bounded organelle
GO:0045444 P fat cell differentiation
GO:0050885 P neuromuscular process controlling balance
GO:0060612 P adipose tissue development
GO:0098793 C presynapse
2510 O_BomoMG14006_3prime_partial:A_BomoMG_comp39610_c0_seq1
236bp
GO:0001558 P regulation of cell growth
GO:0001726 C ruffle
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0008283 P cell population proliferation
GO:0008286 P insulin receptor signaling pathway
GO:0010595 P positive regulation of endothelial cell migration
GO:0015629 C actin cytoskeleton
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030335 P positive regulation of cell migration
GO:0035729 P cellular response to hepatocyte growth factor stimulus
GO:0042981 P regulation of apoptotic process
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048011 P neurotrophin TRK receptor signaling pathway
GO:0048012 P hepatocyte growth factor receptor signaling pathway
GO:0050851 P antigen receptor-mediated signaling pathway
GO:0050852 P T cell receptor signaling pathway
GO:0050853 P B cell receptor signaling pathway
GO:0051301 P cell division
GO:0060326 P cell chemotaxis
2511 O_BomoMG14008_3prime_partial:A_BomoMG_comp39611_c0_seq1
108bp
2512 O_BomoMG14009_5prime_partial:A_BomoMG_comp39612_c0_seq1
832bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
2513 O_BomoMG1400_3prime_partial:A_BomoMG_comp20235_c0_seq1
405bp
 vacuolar_ATPase_subunit_a_[Manduca_sexta]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
2514 O_BomoMG14010_complete:A_BomoMG_comp39612_c0_seq2
972bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
2515 O_BomoMG14011_complete:A_BomoMG_comp39613_c0_seq2
580bp
GO:0000386 F second spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0030628 F pre-mRNA 3'-splice site binding
GO:0046872 F metal ion binding
2516 O_BomoMG14012_complete:A_BomoMG_comp39615_c0_seq1
516bp
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004821 F histidine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006427 P histidyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
2517 O_BomoMG14014_complete:A_BomoMG_comp39615_c0_seq2
523bp
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004821 F histidine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006427 P histidyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
2518 O_BomoMG14016_3prime_partial:A_BomoMG_comp39615_c0_seq3
117bp
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
2519 O_BomoMG14017_internal:A_BomoMG_comp39617_c0_seq1
417bp
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042491 P inner ear auditory receptor cell differentiation
2520 O_BomoMG14018_5prime_partial:A_BomoMG_comp39617_c0_seq2
267bp
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042491 P inner ear auditory receptor cell differentiation
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