Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1981	O_BomoMG13071_5prime_partial:A_BomoMG_comp39361_c0_seq1 645bp	Bomo_Chr21		GO:0004222 F metalloendopeptidase activity GO:0006508 P proteolysis GO:0006509 P membrane protein ectodomain proteolysis GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
1982	O_BomoMG13076_5prime_partial:A_BomoMG_comp39361_c0_seq2 791bp	Bomo_Chr21		GO:0004222 F metalloendopeptidase activity GO:0006508 P proteolysis GO:0006509 P membrane protein ectodomain proteolysis GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
1983	O_BomoMG13081_internal:A_BomoMG_comp39362_c1_seq1 246bp	Bomo_Chr16
1984	O_BomoMG13085_internal:A_BomoMG_comp39362_c1_seq2 400bp	Bomo_Chr16
1985	O_BomoMG13088_internal:A_BomoMG_comp39362_c1_seq3 400bp	Bomo_Chr21
1986	O_BomoMG1308_complete:A_BomoMG_comp20141_c0_seq1 304bp	Bomo_Chr3	PREDICTED:_actin-related_protein_2/3_complex_subunit_2_[Papilio_machaon]	GO:0000902 P cell morphogenesis GO:0003779 F actin binding GO:0005200 F structural constituent of cytoskeleton GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005885 C Arp2/3 protein complex GO:0008064 P regulation of actin polymerization or depolymerization GO:0008360 P regulation of cell shape GO:0015629 C actin cytoskeleton GO:0030031 P cell projection assembly GO:0030833 P regulation of actin filament polymerization GO:0030866 P cortical actin cytoskeleton organization GO:0034314 P Arp2/3 complex-mediated actin nucleation GO:0045179 C apical cortex GO:0046331 P lateral inhibition GO:0070938 C contractile ring
1987	O_BomoMG13091_internal:A_BomoMG_comp39363_c0_seq1 100bp	Bomo_Chr18		GO:0002020 F protease binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0008150 P biological_process GO:0031011 C Ino80 complex
1988	O_BomoMG13092_internal:A_BomoMG_comp39363_c1_seq1 361bp	Bomo_Chr18
1989	O_BomoMG13093_internal:A_BomoMG_comp39363_c1_seq2 303bp	Bomo_Chr18
1990	O_BomoMG13094_internal:A_BomoMG_comp39363_c1_seq2 303bp	Bomo_Chr18
1991	O_BomoMG13095_internal:A_BomoMG_comp39364_c0_seq1 411bp	Bomo_Chr6		GO:0000027 P ribosomal large subunit assembly GO:0001560 P regulation of cell growth by extracellular stimulus GO:0005634 C nucleus GO:0005730 C nucleolus GO:0019843 F rRNA binding GO:0030687 C preribosome, large subunit precursor GO:0044822 F RNA binding
1992	O_BomoMG13096_3prime_partial:A_BomoMG_comp39364_c0_seq2 373bp	Bomo_Chr6		GO:0000027 P ribosomal large subunit assembly GO:0001560 P regulation of cell growth by extracellular stimulus GO:0005634 C nucleus GO:0005730 C nucleolus GO:0019843 F rRNA binding GO:0030687 C preribosome, large subunit precursor GO:0044822 F RNA binding
1993	O_BomoMG13097_3prime_partial:A_BomoMG_comp39365_c1_seq1 277bp	Bomo_Chr8
1994	O_BomoMG13099_5prime_partial:A_BomoMG_comp39365_c1_seq2 542bp	Bomo_Chr8
1995	O_BomoMG1309_complete:A_BomoMG_comp20146_c0_seq1 309bp	Bomo_Chr24	PREDICTED:_extradiol_ring-cleavage_dioxygenase-like_isoform_X1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0006725 P cellular aromatic compound metabolic process GO:0008198 F ferrous iron binding GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0016701 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen GO:0046566 F DOPA dioxygenase activity GO:0046872 F metal ion binding GO:0050297 F stizolobate synthase activity GO:0051213 F dioxygenase activity GO:0055114 P obsolete oxidation-reduction process
1996	O_BomoMG130_internal:A_BomoMG_comp17269_c0_seq1 265bp	Bomo_Chr18	Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008270 F zinc ion binding GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1997	O_BomoMG13104_5prime_partial:A_BomoMG_comp39365_c1_seq3 530bp	Bomo_Chr8
1998	O_BomoMG13109_5prime_partial:A_BomoMG_comp39365_c1_seq4 535bp	Bomo_Chr8
1999	O_BomoMG13114_5prime_partial:A_BomoMG_comp39365_c1_seq5 537bp	Bomo_Chr8
2000	O_BomoMG13119_5prime_partial:A_BomoMG_comp39365_c1_seq6 528bp	Bomo_Chr8
2001	O_BomoMG1311_complete:A_BomoMG_comp20147_c0_seq1 1048bp	Bomo_Chr15	PREDICTED:_NAD(P)_transhydrogenase,_mitochondrial-like_[Amyelois_transitella]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006740 P NADPH regeneration GO:0008746 F NAD(P)+ transhydrogenase activity GO:0008750 F NAD(P)+ transhydrogenase (AB-specific) activity GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016491 F oxidoreductase activity GO:0045454 P cell redox homeostasis GO:0050661 F NADP binding GO:0051287 F NAD binding GO:0055114 P obsolete oxidation-reduction process GO:0072593 P reactive oxygen species metabolic process
2002	O_BomoMG13123_5prime_partial:A_BomoMG_comp39365_c1_seq7 516bp	Bomo_Chr8
2003	O_BomoMG13127_5prime_partial:A_BomoMG_comp39365_c1_seq8 523bp	Bomo_Chr8
2004	O_BomoMG13131_5prime_partial:A_BomoMG_comp39365_c1_seq9 521bp	Bomo_Chr8
2005	O_BomoMG13135_5prime_partial:A_BomoMG_comp39367_c0_seq3 821bp	Bomo_Chr14		GO:0005737 C cytoplasm GO:0007528 P neuromuscular junction development GO:0007614 P short-term memory GO:0008104 P protein localization GO:0008355 P olfactory learning GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016319 P mushroom body development GO:0042462 P eye photoreceptor cell development GO:0042675 P compound eye cone cell differentiation GO:0043025 C neuronal cell body GO:0043204 C perikaryon GO:0051018 F protein kinase A binding
2006	O_BomoMG13137_5prime_partial:A_BomoMG_comp39367_c0_seq4 825bp	Bomo_Chr14		GO:0005737 C cytoplasm GO:0007528 P neuromuscular junction development GO:0007614 P short-term memory GO:0008104 P protein localization GO:0008355 P olfactory learning GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016319 P mushroom body development GO:0042462 P eye photoreceptor cell development GO:0042675 P compound eye cone cell differentiation GO:0043025 C neuronal cell body GO:0043204 C perikaryon GO:0051018 F protein kinase A binding
2007	O_BomoMG13139_internal:A_BomoMG_comp39368_c0_seq1 149bp	Bomo_Chr18		GO:0000012 P single strand break repair GO:0000724 P double-strand break repair via homologous recombination GO:0001666 P response to hypoxia GO:0003684 F damaged DNA binding GO:0003909 F DNA ligase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006281 P DNA repair GO:0006283 P transcription-coupled nucleotide-excision repair GO:0006284 P base-excision repair GO:0006288 P base-excision repair, DNA ligation GO:0006297 P nucleotide-excision repair, DNA gap filling GO:0006974 P cellular response to DNA damage stimulus GO:0010033 P response to organic substance GO:0019899 F enzyme binding GO:0042493 P response to xenobiotic stimulus
2008	O_BomoMG13140_5prime_partial:A_BomoMG_comp39368_c0_seq2 184bp	Bomo_Chr18		GO:0000012 P single strand break repair GO:0000724 P double-strand break repair via homologous recombination GO:0001666 P response to hypoxia GO:0003684 F damaged DNA binding GO:0003909 F DNA ligase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006281 P DNA repair GO:0006283 P transcription-coupled nucleotide-excision repair GO:0006284 P base-excision repair GO:0006288 P base-excision repair, DNA ligation GO:0006297 P nucleotide-excision repair, DNA gap filling GO:0006974 P cellular response to DNA damage stimulus GO:0010033 P response to organic substance GO:0019899 F enzyme binding GO:0042493 P response to xenobiotic stimulus
2009	O_BomoMG13141_5prime_partial:A_BomoMG_comp39368_c0_seq3 184bp	Bomo_Chr18		GO:0000012 P single strand break repair GO:0000724 P double-strand break repair via homologous recombination GO:0001666 P response to hypoxia GO:0003684 F damaged DNA binding GO:0003909 F DNA ligase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006281 P DNA repair GO:0006283 P transcription-coupled nucleotide-excision repair GO:0006284 P base-excision repair GO:0006288 P base-excision repair, DNA ligation GO:0006297 P nucleotide-excision repair, DNA gap filling GO:0006974 P cellular response to DNA damage stimulus GO:0010033 P response to organic substance GO:0019899 F enzyme binding GO:0042493 P response to xenobiotic stimulus
2010	O_BomoMG13143_5prime_partial:A_BomoMG_comp39370_c0_seq1 437bp	Bomo_Chr14		GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005741 C mitochondrial outer membrane GO:0006457 P protein folding GO:0007275 P multicellular organism development GO:0009408 P response to heat GO:0016020 C membrane GO:0031072 F heat shock protein binding GO:0046872 F metal ion binding GO:0051082 F unfolded protein binding